Evidence map›Paper›PMID 34731164›Full record

ArticlePLoS genetics2021

Analysis of growth cone extension in standardized coordinates highlights self-organization rules during wiring of the Drosophila visual system.

Weiyue Ji, Lani F Wu, Steven J Altschuler

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Weiyue JiBiophysics Graduate Group, University of California, San Francisco, San Francisco, California, United States of America.
Lani F WuDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, California, United States of America.
Steven J AltschulerDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, California, United States of America.ORCID 0000-0001-9142-0796
University of California, San Francisco · US

Funding

STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008284 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORTEMME, TANJA · 1988 to 2022
$10.1M
Maximizing the predictive power of high-throughput, microscopy-based phenotypic screensR01CA184984 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WU, LANI F · 2014 to 2025
$4.7M
Reverse-engineering mechanisms of neural circuit wiring in the fly visual systemR01EY028205 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ALTSCHULER, STEVEN J · 2017 to 2020
$1.3M
NCI NIH HHS R01 CA184984NEI NIH HHS R01 EY028205NIGMS NIH HHS T32 GM008284
6 · The paper itself

Abstract

A fascinating question in neuroscience is how ensembles of neurons, originating from different locations, extend to the proper place and by the right time to create precise circuits. Here, we investigate this question in the Drosophila visual system, where photoreceptors re-sort in the lamina to form the crystalline-like neural superposition circuit. The repeated nature of this circuit allowed us to establish a data-driven, standardized coordinate system for quantitative comparison of sparsely perturbed growth cones within and across specimens. Using this common frame of reference, we investigated the extension of the R3 and R4 photoreceptors, which is the only pair of symmetrically arranged photoreceptors with asymmetric target choices. Specifically, we found that extension speeds of the R3 and R4 growth cones are inherent to their cell identities. The ability to parameterize local regularity in tissue organization facilitated the characterization of ensemble cellular behaviors and dissection of mechanisms governing neural circuit formation.

Indexed as

Vision, OcularAnimalsDrosophilaDrosophila ProteinsGrowth ConesPhotoreceptor Cells, InvertebrateDrosophila Proteins

Identifiers

PMID34731164
PMCPMC8565740
OpenAlexW3210066351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.