Evidence map›Paper›PMID 34730398›Full record

ArticleJournal of virology2022

SOSIP Trimer-Specific Antibodies Isolated from a Simian-Human Immunodeficiency Virus-Infected Monkey with versus without a Pre-blocking Step with gp41.

Natasha N Duggan, Kim L Weisgrau, Diogo M Magnani, Eva G Rakasz, Ronald C Desrosiers, Jose M Martinez-Navio

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Natasha N DugganDepartment of Pathology, University of Miamigrid.26790.3a Miller School of Medicine, Miami, Florida, USA.ORCID 0000-0002-1938-9170
Kim L WeisgrauWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Diogo M MagnaniDepartment of Pathology, University of Miamigrid.26790.3a Miller School of Medicine, Miami, Florida, USA.
Eva G RakaszWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Ronald C DesrosiersDepartment of Pathology, University of Miamigrid.26790.3a Miller School of Medicine, Miami, Florida, USA.ORCID 0000-0001-6851-3003
Jose M Martinez-NavioDepartment of Pathology, University of Miamigrid.26790.3a Miller School of Medicine, Miami, Florida, USA.ORCID 0000-0003-0560-5407
University of Miami · USUniversity of Wisconsin–Madison · US

Funding

WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
Immunoglobulins Delivered by AVV Vector for the Prevention of SIV InfectionR01AI098446 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI DESROSIERS, RONALD C · 2012 to 2021
$6.6M
HHS | National Institutes of Health (NIH) R01AI098446NIAID NIH HHS R01 AI098446NIH HHS P51 OD011106
6 · The paper itself

Abstract

BG505 SOSIP.664 (hereafter referred to as SOSIP), a stabilized trimeric mimic of the HIV-1 envelope spike resembling the native viral spike, is a useful tool for isolating anti-HIV-1 neutralizing antibodies. We screened long-term SHIV-AD8 infected rhesus monkeys for potency and breadth of serum neutralizing activity against autologous and heterologous viruses: SHIV-AD8, HIV-1 YU2, HIV-1 JR-CSF, and HIV-1 NL4-3. Monkey rh2436 neutralized all viruses tested and showed strong reactivity to the SOSIP trimer, suggesting this was a promising candidate for attempts at monoclonal antibody (MAb) isolation. MAbs were isolated by performing single B-cell sorts from peripheral blood mononuclear cells (PBMC) by FACS using the SOSIP trimer as a probe. An initial round of sorted cells revealed the majority of isolated MAbs were directed to the gp41 external domain portion of the SOSIP trimer and were mostly non-neutralizing against tested isolates. A second sort was performed, introducing a gp41 blocking step prior to PBMC staining and FACS sorting. These isolated MAbs bound SOSIP trimer but were no longer directed to the gp41 external domain portion. A significantly higher proportion of MAbs with neutralizing activity were obtained with this strategy. Our data show this pre-blocking step with gp41 greatly increases the yield of non-gp41-reactive, SOSIP-specific MAbs and increases the likelihood of isolating MAbs with neutralizing activity.

Indexed as

AnimalsAntibodies, MonoclonalAntibody SpecificityBroadly Neutralizing Antibodiesenv Gene Products, Human Immunodeficiency VirusHIV-1HIV AntibodiesHIV Envelope Protein gp41Immunoglobulin Variable RegionMacaca mulattaRecombinant ProteinsSimian Immunodeficiency VirusAntibodies, MonoclonalBroadly Neutralizing Antibodiesenv Gene Products, Human Immunodeficiency VirusHIV AntibodiesHIV Envelope Protein gp41Immunoglobulin Variable RegionRecombinant Proteinsgp41monoclonal antibodiesneutralizing antibodiesrhesus macaquesSHIVSOSIP

Identifiers

PMID34730398
PMCPMC8791287
OpenAlexW3209582384

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.