Evidence map›Paper›PMID 34729970›Full record

ArticleJournal of biomedical optics2021

Toward cardiac tissue characterization using machine learning and light-scattering spectroscopy.

Nathan J Knighton, Brian K Cottle, Sarthak Tiwari, Abhijit Mondal, Aditya K Kaza, Frank B Sachse, Robert W Hitchcock

Open access · goldAbstract read
In one paragraph

Article in Journal of biomedical optics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Nathan J KnightonUniversity of Utah, Department of Biomedical Engineering, Salt Lake City, United States.
Brian K CottleUniversity of Utah, Department of Biomedical Engineering, Salt Lake City, United States.
Sarthak TiwariUniversity of Utah, Department of Biomedical Engineering, Salt Lake City, United States.
Abhijit MondalBoston Children's Hospital, Harvard Medical School, Department of Cardiac Surgery, Boston, United States.
Aditya K KazaBoston Children's Hospital, Harvard Medical School, Department of Cardiac Surgery, Boston, United States.
Frank B SachseUniversity of Utah, Department of Biomedical Engineering, Salt Lake City, United States.
Robert W HitchcockUniversity of Utah, Department of Biomedical Engineering, Salt Lake City, United States.
University of Utah · USBoston Children's Hospital · USHarrison Medical Center · USHarvard University · US

Funding

Evaluation of Fiberoptic Confocal Microscopy for Pediatric Cardiac SurgeryR01HL135077 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI HITCHCOCK, ROBERT, KAZA, ADITYA K · 2017 to 2020
$2.0M
Evaluation of Fiberoptic Confocal Microscopy for Pediatric Cardiac SurgeryR56HL128813 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI HITCHCOCK, ROBERT, KAZA, ADITYA K · 2016 to 2016
$620k
NHLBI NIH HHS R01 HL135077NHLBI NIH HHS R56 HL128813
6 · The paper itself

Abstract

significanceThe non-destructive characterization of cardiac tissue composition provides essential information for both planning and evaluating the effectiveness of surgical interventions such as ablative procedures. Although several methods of tissue characterization, such as optical coherence tomography and fiber-optic confocal microscopy, show promise, many barriers exist that reduce effectiveness or prevent adoption, such as time delays in analysis, prohibitive costs, and limited scope of application. Developing a rapid, low-cost non-destructive means of characterizing cardiac tissue could improve planning, implementation, and evaluation of cardiac surgical procedures.

aimTo determine whether a new light-scattering spectroscopy (LSS) system that analyzes spectra via neural networks is capable of predicting the nuclear densities (NDs) of ventricular tissues. APPROACH: We developed an LSS system with a fiber-optics probe and applied it for measurements on cardiac tissues from an ovine model. We quantified the ND in the cardiac tissues using fluorescent labeling, confocal microscopy, and image processing. Spectra acquired from the same cardiac tissues were analyzed with spectral clustering and convolutional neural networks (CNNs) to assess the feasibility of characterizing the ND of tissue via LSS.

resultsSpectral clustering revealed distinct groups of spectra correlated to ranges of ND. CNNs classified three groups of spectra with low, medium, or high ND with an accuracy of 95.00  ±  11.77  %   (mean and standard deviation). Our analyses revealed the sensitivity of the classification accuracy to wavelength range and subsampling of spectra.

conclusionsLSS and machine learning are capable of assessing ND in cardiac tissues. We suggest that the approach is useful for the diagnosis of cardiac diseases associated with changes of ND, such as hypertrophy and fibrosis.

Indexed as

Machine LearningNeural Networks, ComputerAnimalsFiber Optic TechnologyImage Processing, Computer-AssistedSheepSpectrum Analysiscardiacconvolutional neural networklight-scattering spectroscopymachine learningoptical biopsyspectral clustering

Identifiers

PMID34729970
PMCPMC8562351
OpenAlexW3209012307

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.