Evidence map›Paper›PMID 34729303›Full record

ArticleActa pharmaceutica Sinica. B2021

MCDB: A comprehensive curated mitotic catastrophe database for retrieval, protein sequence alignment, and target prediction.

Le Zhang, Lei Zhang, Yue Guo, Ming Xiao, Lu Feng, Chengcan Yang, Guan Wang, Liang Ouyang

Abstract read
In one paragraph

Article in Acta pharmaceutica Sinica. B, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

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  8. IFNIKB: a type I interferon database for antitumuor immunity studies.Database : the journal of biological databases and curation · 2026
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  15. A Review of the Application of Spatial Transcriptomics in Neuroscience.Interdisciplinary sciences, computational life sciences · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Le ZhangInnovation Center of Nursing Research, West China Biomedical Big Data Center, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, College of Computer Science, and Collaborative Innovation Center of Biotherapy, Sichuan University, Chengdu 610065, China.
Lei ZhangInnovation Center of Nursing Research, West China Biomedical Big Data Center, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, College of Computer Science, and Collaborative Innovation Center of Biotherapy, Sichuan University, Chengdu 610065, China.
Yue GuoInnovation Center of Nursing Research, West China Biomedical Big Data Center, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, College of Computer Science, and Collaborative Innovation Center of Biotherapy, Sichuan University, Chengdu 610065, China.
Ming XiaoInnovation Center of Nursing Research, West China Biomedical Big Data Center, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, College of Computer Science, and Collaborative Innovation Center of Biotherapy, Sichuan University, Chengdu 610065, China.
Lu FengInnovation Center of Nursing Research, West China Biomedical Big Data Center, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, College of Computer Science, and Collaborative Innovation Center of Biotherapy, Sichuan University, Chengdu 610065, China.
Chengcan YangInnovation Center of Nursing Research, West China Biomedical Big Data Center, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, College of Computer Science, and Collaborative Innovation Center of Biotherapy, Sichuan University, Chengdu 610065, China.
Guan WangInnovation Center of Nursing Research, West China Biomedical Big Data Center, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, College of Computer Science, and Collaborative Innovation Center of Biotherapy, Sichuan University, Chengdu 610065, China.
Liang OuyangInnovation Center of Nursing Research, West China Biomedical Big Data Center, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, College of Computer Science, and Collaborative Innovation Center of Biotherapy, Sichuan University, Chengdu 610065, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitotic catastrophe (MC) is a form of programmed cell death induced by mitotic process disorders, which is very important in tumor prevention, development, and drug resistance. Because rapidly increased data for MC is vigorously promoting the tumor-related biomedical and clinical study, it is urgent for us to develop a professional and comprehensive database to curate MC-related data. Mitotic Catastrophe Database (MCDB) consists of 1214 genes/proteins and 5014 compounds collected and organized from more than 8000 research articles. Also, MCDB defines the confidence level, classification criteria, and uniform naming rules for MC-related data, which greatly improves data reliability and retrieval convenience. Moreover, MCDB develops protein sequence alignment and target prediction functions. The former can be used to predict new potential MC-related genes and proteins, and the latter can facilitate the identification of potential target proteins of unknown MC-related compounds. In short, MCDB is such a proprietary, standard, and comprehensive database for MC-relate data that will facilitate the exploration of MC from chemists to biologists in the fields of medicinal chemistry, molecular biology, bioinformatics, oncology and so on. The MCDB is distributed on http://www.combio-lezhang.online/MCDB/index_html/.

Indexed as

DatabaseData miningGO, Gene OntologyInChI, International Chemical IdentifierInChI Key, International Chemical Identifier hashIUPAC, International Union of Pure and Applied ChemistryMCDB, Mitotic Catastrophe DatabaseMC, Mitotic CatastropheMitotic catastrophePDB, Protein Data BankPMID, PubMed identifierProtein sequence analysisPubChem, Public ChemistryPubMed, Public MedicineSMILES, Simplified Molecular Input Line Entry SpecificationTarget predictionUniProt, Universal Protein Resource

Identifiers

PMID34729303
PMCPMC8546929

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.