Evidence map›Paper›PMID 34728552›Full record

ArticleMolecular cancer research : MCR2022

A Functional Precision Oncology Approach to Identify Treatment Strategies for Myxofibrosarcoma Patients.

Chantal Pauli, Lamberto De Boni, Jonathan E Pauwels, Yanjiang Chen, Lara Planas-Paz, Reid Shaw, Brooke M Emerling, Carla Grandori, Benjamin D Hopkins, Mark A Rubin

Open access · greenAbstract readCase Reports
In one paragraph

Article in Molecular cancer research : MCR, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. The functional imperative in high-grade glioma.Experimental & molecular medicine · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Chantal PauliDepartment of Pathology and Molecular Pathology, University Hospital Zurich, Zurich, Switzerland. chantal.pauli@usz.ch.
Lamberto De BoniDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.
Jonathan E PauwelsEnglander Institute for Precision Medicine, Weill Cornell Medicine-New York Presbyterian Hospital. New York, New York.
Yanjiang ChenDepartment of Pathology and Molecular Pathology, University Hospital Zurich, Zurich, Switzerland.ORCID 0000-0002-2355-7878
Lara Planas-PazDepartment of Pathology and Molecular Pathology, University Hospital Zurich, Zurich, Switzerland.
Reid ShawSEngine Precision Medicine, Seattle, Washington.
Brooke M EmerlingCancer Metabolism and Signaling Networks, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.ORCID 0000-0002-2168-4582
Carla GrandoriSEngine Precision Medicine, Seattle, Washington.
Benjamin D Hopkins *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.
Mark A Rubin *Englander Institute for Precision Medicine, Weill Cornell Medicine-New York Presbyterian Hospital. New York, New York.ORCID 0000-0002-8321-9950
University Hospital of Zurich · CHIcahn School of Medicine at Mount Sinai · USPrecision for Medicine (United States) · USCornell University · USDiscovery Institute · USUniversity of Bern · CH

Funding

Research Education About Cancer and Health (REACH) CoreU54CA132381 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI KAREN R PETERSON · 2007 to 2026
$25.3M
Epitomic Biomarkers of Prostate CancerU01CA111275 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHINNAIYAN, ARUL M, RUBIN, MARK A. · 2004 to 2015
$6.8M
Molecular Signatures of Lethal and Indolent Prostate CancerR01CA116337 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI RUBIN, MARK A. · 2006 to 2016
$5.3M
An integrated computational and functional genomics discovery engine for precliniU01CA176303 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI KEMP, CHRISTOPHER J · 2013 to 2016
$4.1M
Non-Canonical Phosphatidylinositol Kinases in Triple Negative Breast CancerR01CA237536 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI EMERLING, BROOKE M · 2020 to 2024
$2.2M
Utilizing Precision Medicine to elucidate the mechanisms underpinning treatment efficacyR00CA230384 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HOPKINS, BENJAMIN D. · 2019 to 2021
$718k
Utilizing Precision Medicine to elucidate the mechanisms underpinning treatment efficacyK99CA230384 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI HOPKINS, BENJAMIN D. · 2018 to 2018
$108k
NCI NIH HHS K99 CA230384NCI NIH HHS R00 CA230384NCI NIH HHS R01 CA116337NCI NIH HHS R01 CA237536NCI NIH HHS U01 CA111275NCI NIH HHS U01 CA176303NCI NIH HHS U54 CA132381
6 · The paper itself

Abstract

In this era of precision medicine, numerous workflows for the targeting of high-recurrent mutations in common tumor types have been developed, leaving patients with rare diseases with few options. Here, we implement a functional precision oncology approach utilizing comprehensive genomic profiling in combination with high-throughput drug screening, to identify tumor-specific drug sensitivities for patients with rare tumor types such as myxofibrosarcoma. From a patient with a high-grade myxofibrosarcoma, who was enrolled in the Englander Institute for Precision Medicine (EIPM) program, we established patient-derived 3D

Indexed as

AnimalsBiomarkers, TumorFemaleFibrosarcomaHigh-Throughput Nucleotide SequencingHumansMedical OncologyMiceMice, NudeMolecular Targeted TherapyMutationPrecision MedicineBiomarkers, Tumor

Identifiers

PMID34728552
PMCPMC8900059
OpenAlexW3210223065

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.