Evidence map›Paper›PMID 34727239›Full record

ArticlePlanta2021

UPLC-MS/MS analysis and biological activity of the potato cyst nematode hatching stimulant, solanoeclepin A, in the root exudate of Solanum spp.

Alessandra Guerrieri, Kristýna Floková, Lieke E Vlaar, Mario L Schilder, Gertjan Kramer, Aleksandra Chojnacka, Yannick R van Dijk, Harro J Bouwmeester, Lemeng Dong

Open access · hybridAbstract read
In one paragraph

Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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  10. Review of nematode interactions with hemp (Journal of nematology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Alessandra Guerrieri *Plant Hormone Biology Group, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands.
Kristýna Floková *Plant Hormone Biology Group, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands.
Lieke E VlaarPlant Hormone Biology Group, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands.
Mario L SchilderPlant Hormone Biology Group, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands.
Gertjan KramerMass Spectrometry of Biomolecules, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands.
Aleksandra ChojnackaBiomolecular System Analytics, Van't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Amsterdam, The Netherlands.
Yannick R van DijkPlant Hormone Biology Group, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands.
Harro J BouwmeesterPlant Hormone Biology Group, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands. h.j.bouwmeester@uva.nl.
Lemeng DongPlant Hormone Biology Group, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands. l.dong2@uva.nl.ORCID http://orcid.org/0000-0002-1435-1907
Netherlands Institute for Neuroscience · NLUniversity of Amsterdam · NL

Funding

dutch research council nwo-ttw 16873European Research Council 670211h2020 marie skłodowska-curie actions 793795
6 · The paper itself

Abstract

MAIN

conclusionSolanoeclepin A is a hatching stimulant for potato cyst nematode in very low (pM) concentrations. We report a highly sensitive method for the analysis of SolA in plant root exudates using UHPLC-MS/MS and show that there is considerable natural variation in SolA production in Solanum spp. corresponding with their hatching inducing activity. Potato cyst nematode (PCN) is a plant root sedentary endoparasite, specialized in the infection of solanaceous species such as potato (Solanum tuberosum) and tomato (Solanum lycopersicum). Earlier reports (Mulder et al. in Hatching agent for the potato cyst nematode, Patent application No. PCT/NL92/00126, 1996; Schenk et al. in Croat Chem Acta 72:593-606, 1999) showed that solanoeclepin A (SolA), a triterpenoid metabolite that was isolated from the root exudate of potato, induces the hatching of PCN. Its low concentration in potato root exudate has hindered progress in fully understanding its hatching inducing activity and exploitation in the control of PCN. To further investigate the role of SolA in hatching of PCN, the establishment of a highly sensitive analytical method is a prerequisite. Here we present the efficient single-step extraction and UHPLC-MS/MS based analysis for rapid determination of SolA in sub-nanomolar concentrations in tomato root exudate. This method was used to analyze SolA production in different tomato cultivars and related solanaceous species, including the trap crop Solanum sisymbriifolium. Hatching assays with PCN, Globodera pallida, with root exudates of tomato genotypes revealed a significant positive correlation between SolA concentration and hatching activity. Our results demonstrate that there is natural variation in SolA production within solanaceous species and that this has an effect on PCN hatching. The analytical method we have developed can potentially be used to support breeding for crop genotypes that induce less hatching and may therefore display reduced infection by PCN.

Indexed as

Solanum tuberosumTylenchoideaAnimalsBridged-Ring CompoundsChromatography, High Pressure LiquidChromatography, LiquidExudates and TransudatesHexanesPlant BreedingPlant DiseasesPlant RootsTandem Mass SpectrometryBridged-Ring CompoundsHexanessolanoeclepin AAnalytical chemistryEclepinsHatching assaySolid phase extraction (SPE)Tomato root exudates

Identifiers

PMID34727239
PMCPMC8563560
OpenAlexW3209466591

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.