Evidence map›Paper›PMID 34726594›Full record

ArticleThe Journal of general virology2021

Amino acid substitutions in the H5N1 avian influenza haemagglutinin alter pH of fusion and receptor binding to promote a highly pathogenic phenotype in chickens.

Joshua E Sealy, Wendy A Howard, Eleonora Molesti, Munir Iqbal, Nigel J Temperton, Jill Banks, Marek J Slomka, Wendy S Barclay, Jason S Long

Open access · hybridAbstract read
In one paragraph

Article in The Journal of general virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. The Q226L mutation can convert a highly pathogenic H5 2.3.4.4e virus to bind human-type receptors.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Joshua E SealyAvian Influenza Group, The Pirbright Institute, Woking, GU24 0NF, UK.
Wendy A HowardVirology Department, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, Addlestone, Surrey KT15 3NB, UK.
Eleonora MolestiViral Pseudotype Unit, Medway School of Pharmacy, University of Kent, UK.
Munir IqbalAvian Influenza Group, The Pirbright Institute, Woking, GU24 0NF, UK.
Nigel J TempertonViral Pseudotype Unit, Medway School of Pharmacy, University of Kent, UK.
Jill BanksVirology Department, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, Addlestone, Surrey KT15 3NB, UK.
Marek J SlomkaVirology Department, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, Addlestone, Surrey KT15 3NB, UK.
Wendy S BarclayDepartment of Infectious Disease, Faculty of Medicine, Imperial College London, St. Mary's Campus, London W2 1NY, UK.
Jason S LongVirology Department, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, Addlestone, Surrey KT15 3NB, UK.
Animal and Plant Health Agency · GBMedway School of Pharmacy · GBThe Pirbright Institute · GBImperial College London · GB

Funding

Biotechnology and Biological Sciences Research Council BB/K002465/1
6 · The paper itself

Abstract

Highly pathogenic H5N1 avian influenza viruses cause devastating outbreaks in farmed poultry with serious consequences for animal welfare and economic losses. Zoonotic infection of humans through close contact with H5N1 infected birds is often severe and fatal. England experienced an outbreak of H5N1 in turkeys in 1991 that led to thousands of farmed bird mortalities. Isolation of clonal populations of one such virus from this outbreak uncovered amino acid differences in the virus haemagglutinin (HA) gene whereby the different genotypes could be associated with distinct pathogenic outcomes in chickens; both low pathogenic (LP) and high pathogenic (HP) phenotypes could be observed despite all containing a multi-basic cleavage site (MBCS) in the HA gene. Using reverse genetics, three amino acid substitutions in HA were examined for their ability to affect pathogenesis in the chicken. Restoration of amino acid polymorphisms close to the receptor binding site that are commonly found in H5 viruses only partially improved viral fitness

Indexed as

Amino Acid SubstitutionAnimalsCell FusionChickensHemagglutinin Glycoproteins, Influenza VirusHydrogen-Ion ConcentrationInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsPoultry DiseasesProtein BindingReceptors, VirusVirulenceHemagglutinin Glycoproteins, Influenza VirusReceptors, Virusavian influenzafusionH5N1haemagglutinininfluenzapathogenicity

Identifiers

PMID34726594
PMCPMC8742987
OpenAlexW3209062444

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.