Evidence map›Paper›PMID 34725463›Full record

ArticleCommunications biology2021

Antisense oligonucleotide activity in tumour cells is influenced by intracellular LBPA distribution and extracellular vesicle recycling.

Alexander N Kapustin, Paul Davey, David Longmire, Carl Matthews, Emily Linnane, Nitin Rustogi, Maria Stavrou, Paul W A Devine, Nicholas J Bond, Lyndsey Hanson and 6 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 3 countries.

Alexander N KapustinAdvanced Drug Delivery, Pharmaceutical Sciences, BioPharmaceuticals R&D, AstraZeneca, Cambridge, UK. alexander.kapustin@astrazeneca.com.ORCID 0000-0003-3552-830X
Paul DaveyChemistry, Research and Early Development, Oncology R&D, AstraZeneca, Cambridge, UK.
David LongmireChemistry, Research and Early Development, Oncology R&D, AstraZeneca, Cambridge, UK.
Carl MatthewsAntibody Discovery & Protein Engineering, R&D, AstraZeneca, Cambridge, UK.ORCID 0000-0002-3629-371X
Emily LinnaneBioscience, Research and Early Development, Oncology R&D, AstraZeneca, Cambridge, UK.
Nitin RustogiAnalytical Sciences, Biopharmaceutical Development, R&D, AstraZeneca, Cambridge, UK.ORCID 0000-0002-4381-1271
Maria StavrouAnalytical Sciences, Biopharmaceutical Development, R&D, AstraZeneca, Cambridge, UK.
Paul W A DevineAnalytical Sciences, Biopharmaceutical Development, R&D, AstraZeneca, Cambridge, UK.
Nicholas J BondAnalytical Sciences, Biopharmaceutical Development, R&D, AstraZeneca, Cambridge, UK.
Lyndsey HansonBioscience, Research and Early Development, Oncology R&D, AstraZeneca, Alderley Park, UK.
Silvia SonziniAdvanced Drug Delivery, Pharmaceutical Sciences, BioPharmaceuticals R&D, AstraZeneca, Cambridge, UK.ORCID 0000-0002-7473-546X
Alexey RevenkoIonis Pharmaceuticals, Carlsbad, CA, 92010, USA.ORCID 0000-0002-4863-362X
A Robert MacLeodIonis Pharmaceuticals, Carlsbad, CA, 92010, USA.
Sarah RossBioscience, Research and Early Development, Oncology R&D, AstraZeneca, Cambridge, UK.
Elisabetta ChiarparinChemistry, Research and Early Development, Oncology R&D, AstraZeneca, Cambridge, UK.
Sanyogitta PuriAdvanced Drug Delivery, Pharmaceutical Sciences, BioPharmaceuticals R&D, AstraZeneca, Cambridge, UK.
AstraZeneca (United Kingdom) · GBIonis Pharmaceuticals (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Next generation modified antisense oligonucleotides (ASOs) are commercially approved new therapeutic modalities, yet poor productive uptake and endosomal entrapment in tumour cells limit their broad application. Here we compare intracellular traffic of anti KRAS antisense oligonucleotide (AZD4785) in tumour cell lines PC9 and LK2, with good and poor productive uptake, respectively. We find that the majority of AZD4785 is rapidly delivered to CD63+late endosomes (LE) in both cell lines. Importantly, lysobisphosphatidic acid (LBPA) that triggers ASO LE escape is presented in CD63+LE in PC9 but not in LK2 cells. Moreover, both cell lines recycle AZD4785 in extracellular vesicles (EVs); however, AZD4785 quantification by advanced mass spectrometry and proteomic analysis reveals that LK2 recycles more AZD4785 and RNA-binding proteins. Finally, stimulating LBPA intracellular production or blocking EV recycling enhances AZD4785 activity in LK2 but not in PC9 cells thus offering a possible strategy to enhance ASO potency in tumour cells with poor productive uptake of ASOs.

Indexed as

Antineoplastic AgentsCell Line, TumorExtracellular VesiclesHumansLysophospholipidsMonoglyceridesOligodeoxyribonucleotides, AntisenseAntineoplastic Agentsbis(monoacylglyceryl)phosphateLysophospholipidsMonoglyceridesOligodeoxyribonucleotides, Antisense

Identifiers

PMID34725463
PMCPMC8560811
OpenAlexW3208570596

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.