Evidence map›Paper›PMID 34724818›Full record

ArticlemBio2021

Candida albicans Isolates 529L and CHN1 Exhibit Stable Colonization of the Murine Gastrointestinal Tract.

Liam D McDonough, Animesh A Mishra, Nicholas Tosini, Pallavi Kakade, Swathi Penumutchu, Shen-Huan Liang, Corrine Maufrais, Bing Zhai, Ying Taur, Peter Belenky and 4 more

Abstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Phenotypic and genotypic analysis ofInfection and immunity · 2026
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  8. A CandiChrome toolkit for multicolor labeling ofbioRxiv : the preprint server for biology · 2026
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  9. Article
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  12. mBio · 2025
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  13. Review
  14. Infection and immunity · 2025
    Review
  15. Commensal colonization ofMicrobiology spectrum · 2025
    Article
  16. Article
  17. Review
  18. Article
  19. Transcriptomic insights intoMicrobiology spectrum · 2025
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Liam D McDonough *Department of Molecular Microbiology and Immunology, Brown Universitygrid.40263.33, Providence, Rhode Island, USA.
Animesh A Mishra *Department of Microbiology, University of Texas Southwestern Medical Center, Dallas, Texas, USA.
Nicholas Tosini *Infectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Centergrid.51462.34, New York, New York, USA.
Pallavi KakadeDepartment of Molecular Microbiology and Immunology, Brown Universitygrid.40263.33, Providence, Rhode Island, USA.
Swathi PenumutchuDepartment of Molecular Microbiology and Immunology, Brown Universitygrid.40263.33, Providence, Rhode Island, USA.
Shen-Huan LiangDepartment of Molecular Microbiology and Immunology, Brown Universitygrid.40263.33, Providence, Rhode Island, USA.
Corrine MaufraisDepartment of Mycology, Institut Pasteurgrid.428999.7, Paris, France.
Bing ZhaiInfectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Centergrid.51462.34, New York, New York, USA.
Ying TaurInfectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Centergrid.51462.34, New York, New York, USA.
Peter BelenkyDepartment of Molecular Microbiology and Immunology, Brown Universitygrid.40263.33, Providence, Rhode Island, USA.ORCID 0000-0002-1682-945X
Richard J BennettDepartment of Molecular Microbiology and Immunology, Brown Universitygrid.40263.33, Providence, Rhode Island, USA.ORCID 0000-0001-7563-484X
Tobias M HohlInfectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Centergrid.51462.34, New York, New York, USA.ORCID 0000-0002-9097-5412
Andrew Y KohDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, Texas, USA.ORCID 0000-0003-2172-5126
Iuliana V EneDepartment of Molecular Microbiology and Immunology, Brown Universitygrid.40263.33, Providence, Rhode Island, USA.ORCID 0000-0002-0390-7084

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
The role of Sirtuins in neurodegenerative diseaseP20GM109035 · NIGMS · BROWN UNIVERSITY · PI WONG, IAN Y · 2016 to 2025
$22.6M
Transcriptional Regulation of C. albicans Cell Fate and Host InteractionsR01AI081704 · NIAID · BROWN UNIVERSITY · PI Richard John Bennett · 2010 to 2026
$6.4M
INITIATION OF THE IMMUNE RESPONSE TO ASPERGILLUS FUMIGATUSR01AI093808 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI HOHL, TOBIAS M · 2011 to 2020
$4.9M
INITIATION OF THE IMMUNE RESPONSE TO ASPERGILLUS FUMIGATUSR37AI093808 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI TOBIAS M HOHL · 2021 to 2026
$4.2M
Antifungal Immunity and the Mechanism of Fungal Programmed Cell DeathR01AI139632 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI CRAMER, ROBERT ANDREW, HOHL, TOBIAS M · 2019 to 2023
$3.3M
Genetic Regulation of Heritable Switching in Candida albicansR01AI141893 · NIAID · BROWN UNIVERSITY · PI BENNETT, RICHARD JOHN · 2019 to 2023
$2.7M
Relating impacts of antibiotics on the gut metabolome and microbiome to host physiology and weight.R01DK125382 · NIDDK · BROWN UNIVERSITY · PI BELENKY, PETER · 2020 to 2024
$2.7M
Candida Albicans Gastrointestinal Colonization and DisseminationR01AI123163 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI KOH, ANDREW · 2016 to 2020
$2.0M
Predoctoral Training Program in Biological Data Science at Brown UniversityT32GM128596 · NIGMS · BROWN UNIVERSITY · PI RAMACHANDRAN, SOHINI, SANDSTEDE, BJORN · 2018 to 2022
$1.5M
Mentoring Patient Oriented Research in the Microbiome of Cancer and Stem Cell Transplant PatientsK24AI150992 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI KOH, ANDREW · 2020 to 2024
$592k
The mycobiota, bone marrow transplantation, and clinical outcomesR21AI156157 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI HOHL, TOBIAS M · 2021 to 2022
$487k
NCCIH NIH HHS R21 AT010366NCI NIH HHS P30 CA008748NIAID NIH HHS K24 AI150992NIAID NIH HHS R01 AI081704NIAID NIH HHS R01 AI093808NIAID NIH HHS R01 AI123163NIAID NIH HHS R01 AI139632NIAID NIH HHS R01 AI141893NIAID NIH HHS R21 AI105617NIAID NIH HHS R21 AI139592NIAID NIH HHS R21 AI144651NIAID NIH HHS R21 AI156157NIAID NIH HHS R37 AI093808NIDDK NIH HHS R01 DK125382NIGMS NIH HHS P20 GM109035NIGMS NIH HHS T32 GM128596
6 · The paper itself

Abstract

Candida albicans is a pathobiont that colonizes multiple niches in the body including the gastrointestinal (GI) tract but is also responsible for both mucosal and systemic infections. Despite its prevalence as a human commensal, the murine GI tract is generally refractory to colonization with the C. albicans reference isolate SC5314. Here, we identify two C. albicans isolates, 529L and CHN1, that stably colonize the murine GI tract in three different animal facilities under conditions where SC5314 is lost from this niche. Analysis of the bacterial microbiota did not show notable differences among mice colonized with the three C. albicans strains. We compared the genotypes and phenotypes of these three strains and identified thousands of single nucleotide polymorphisms (SNPs) and multiple phenotypic differences, including their ability to grow and filament in response to nutritional cues. Despite striking filamentation differences under laboratory conditions, however, analysis of cell morphology in the GI tract revealed that the three isolates exhibited similar filamentation properties in this

Indexed as

Gastrointestinal MicrobiomeAnimalsCandida albicansFemaleGastrointestinal TractGenotypeMiceMice, Inbred BALB CMice, Inbred C3HMice, Inbred C57BLSymbiosisfungal biologygastrointestinal colonizationmicrobiomestrain diversity

Identifiers

PMID34724818
PMCPMC8561340

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.