Evidence map›Paper›PMID 34723961›Full record

ArticlePLoS computational biology2021

Mathematical modelling of human P2X-mediated plasma membrane electrophysiology and calcium dynamics in microglia.

Alireza Poshtkohi, John Wade, Liam McDaid, Junxiu Liu, Mark Dallas, Angela Bithell

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Alireza PoshtkohiSchool of Computing, Engineering and Intelligent Systems, Ulster University, Londonderry, United Kingdom.ORCID 0000-0001-5636-1567
John WadeSchool of Computing, Engineering and Intelligent Systems, Ulster University, Londonderry, United Kingdom.ORCID 0000-0003-1300-9429
Liam McDaidSchool of Computing, Engineering and Intelligent Systems, Ulster University, Londonderry, United Kingdom.ORCID 0000-0002-1197-4375
Junxiu LiuSchool of Computing, Engineering and Intelligent Systems, Ulster University, Londonderry, United Kingdom.ORCID 0000-0002-9790-1571
Mark DallasSchool of Pharmacy, University of Reading, Reading, United Kingdom.ORCID 0000-0002-5190-0522
Angela BithellSchool of Pharmacy, University of Reading, Reading, United Kingdom.ORCID 0000-0002-0294-078X
University of Ulster · GBUniversity of Reading · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Regulation of cytosolic calcium (Ca2+) dynamics is fundamental to microglial function. Temporal and spatial Ca2+ fluxes are induced from a complicated signal transduction pathway linked to brain ionic homeostasis. In this paper, we develop a novel biophysical model of Ca2+ and sodium (Na+) dynamics in human microglia and evaluate the contribution of purinergic receptors (P2XRs) to both intracellular Ca2+ and Na+ levels in response to agonist/ATP binding. This is the first comprehensive model that integrates P2XRs to predict intricate Ca2+ and Na+ transient responses in microglia. Specifically, a novel compact biophysical model is proposed for the capture of whole-cell patch-clamp currents associated with P2X4 and P2X7 receptors, which is composed of only four state variables. The entire model shows that intricate intracellular ion dynamics arise from the coupled interaction between P2X4 and P2X7 receptors, the Na+/Ca2+ exchanger (NCX), Ca2+ extrusion by the plasma membrane Ca2+ ATPase (PMCA), and Ca2+ and Na+ leak channels. Both P2XRs are modelled as two separate adenosine triphosphate (ATP) gated Ca2+ and Na+ conductance channels, where the stoichiometry is the removal of one Ca2+ for the hydrolysis of one ATP molecule. Two unique sets of model parameters were determined using an evolutionary algorithm to optimise fitting to experimental data for each of the receptors. This allows the proposed model to capture both human P2X7 and P2X4 data (hP2X7 and hP2X4). The model architecture enables a high degree of simplicity, accuracy and predictability of Ca2+ and Na+ dynamics thus providing quantitative insights into different behaviours of intracellular Na+ and Ca2+ which will guide future experimental research. Understanding the interactions between these receptors and other membrane-bound transporters provides a step forward in resolving the qualitative link between purinergic receptors and microglial physiology and their contribution to brain pathology.

Indexed as

Models, BiologicalAdenosine TriphosphateAlgorithmsCalciumCell MembraneHumansHydrolysisMembrane PotentialsMicrogliaReceptors, Purinergic P2XSodiumSodium-Calcium ExchangerAdenosine TriphosphateCalciumReceptors, Purinergic P2XSodiumSodium-Calcium Exchangersodium-calcium exchanger 1

Identifiers

PMID34723961
PMCPMC8584768
OpenAlexW3210999865

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.