Evidence map›Paper›PMID 34722263›Full record

ArticleFrontiers in oncology2021

Single-Cell RNA Sequencing in Multiple Pathologic Types of Renal Cell Carcinoma Revealed Novel Potential Tumor-Specific Markers.

Cheng Su, Yufang Lv, Wenhao Lu, Zhenyuan Yu, Yu Ye, Bingqian Guo, Deyun Liu, Haibiao Yan, Tianyu Li, Qingyun Zhang and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 1 synthesis or guideline pooled it, 113 citations in OpenAlex.

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28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Cheng SuDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Yufang LvDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Wenhao LuDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Zhenyuan YuDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Yu YeDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Bingqian GuoCenter for Genomic and Personalized Medicine, Guangxi Key Laboratory for Genomic and Personalized Medicine, Guangxi Collaborative Innovation Center for Genomic and Personalized Medicine, Guangxi Medical University, Nanning, China.
Deyun LiuDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Haibiao YanDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Tianyu LiDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Qingyun ZhangDepartment of Urology, Affiliated Tumor Hospital of Guangxi Medical University, Nanning, China.
Jiwen ChengDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Zengnan MoDepartment of Urology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
First Affiliated Hospital of GuangXi Medical University · CNGuangxi Medical University · CNTumor Hospital of Guangxi Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRenal cell carcinoma (RCC) is the most common type of kidney cancer. Studying the pathogenesis of RCC is particularly important, because it could provide a direct guide for clinical treatment. Given that tumor heterogeneity is probably reflected at the mRNA level, the study of mRNA in RCC may reveal some potential tumor-specific markers, especially single-cell RNA sequencing (scRNA-seq).

methodsWe performed an exploratory study on three pathological types of RCC with a small sample size. This study presented clear-cell RCC (ccRCC), type 2 pRCC, and chRCC in a total of 30,263 high-quality single-cell transcriptome information from three pathological types of RCC. In addition, scRNA-seq was performed on normal kidneys. Tumor characteristics were well identified by the comparison between different pathological types of RCC and normal kidneys at the scRNA level.

resultsSome new tumor-specific markers for different pathologic types of RCC, such as

conclusionsTaken together, these findings considerably enriched the single-cell transcriptomic information for RCC, thereby providing new insights into the diagnosis and treatment of RCC.

Indexed as

cancer-associated fibroblastsendothelial cellsrenal cell carcinomaScRNA-seqsingle-cell RNA sequencingtumor-immune microenvironmenttumor-specific markers

Identifiers

PMID34722263
PMCPMC8551404
OpenAlexW3205985210

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.