Evidence map›Paper›PMID 34722001›Full record

ArticlePeerJ2021

Transcriptomic analysis reveals candidate genes for male sterility in

Jianhua Chen, Hao Xu, Jian Zhang, Shengjun Dong, Quangang Liu, Ruoxi Wang

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jianhua ChenCollege of Forestry, Shenyang Agricultural University, Shenyang, Liaoning, China.
Hao XuCollege of Forestry, Shenyang Agricultural University, Shenyang, Liaoning, China.
Jian ZhangCollege of Forestry, Shenyang Agricultural University, Shenyang, Liaoning, China.
Shengjun DongCollege of Forestry, Shenyang Agricultural University, Shenyang, Liaoning, China.
Quangang LiuCollege of Forestry, Shenyang Agricultural University, Shenyang, Liaoning, China.
Ruoxi WangCollege of Forestry, Shenyang Agricultural University, Shenyang, Liaoning, China.
Shenyang Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe phenomenon of male sterility widely occurs in

methodThe microstructures of male sterile flower buds and male fertile flower buds were observed by paraffin section. Transcriptome sequencing was used to screen genes related to male sterility in

resultsAnther development was divided into the sporogenous cell stage, tetrad stage, microspore stage, and pollen maturity stage. Compared with male fertile flower buds, in the microspore stage, the pollen sac wall tissue in the male sterile flower buds showed no signs of degeneration. In the pollen maturity stage, the tapetum and middle layer were not fully degraded, and anther development stopped. Therefore, the microspore stage was the key stage for anther abortion , and the pollen maturity stage was the post stage for anther abortion. A total of 4,108 differentially expressed genes were identified by transcriptome analysis. Among them, 1,899 were up-regulated, and 2,209 were down-regulated in the transcriptome of male sterile flower buds. We found that "protein kinase activity", "apoptosis process", "calcium binding", "cell death", "cytochrome c oxidase activity", "aspartate peptidase activity", "cysteine peptidase activity" and other biological pathways such as "starch and sucrose metabolism" and "proteasome" were closely related to male sterility in

conclusionThe occurrence of male sterility in

Indexed as

Male sterilityMicrostructurePrunus sibiricaRT-qPCRTranscriptome sequencing

Identifiers

PMID34722001
PMCPMC8541319
OpenAlexW3207458025

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.