Evidence map›Paper›PMID 34719681›Full record

ArticleJournal of human genetics2022

Two families with TET3-related disorder showing neurodevelopmental delay with craniofacial dysmorphisms.

Rie Seyama, Naomi Tsuchida, Yasuyuki Okada, Sonoko Sakata, Keisuke Hamada, Yoshiteru Azuma, Kohei Hamanaka, Atsushi Fujita, Eriko Koshimizu, Satoko Miyatake and 8 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of human genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 1 country.

Rie SeyamaDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.ORCID http://orcid.org/0000-0001-9522-1268
Naomi TsuchidaDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.
Yasuyuki OkadaDepartment of Pediatrics, National Hospital Organization Higashihiroshima Medical Center, Higashihiroshima, Japan.
Sonoko SakataDepartment of Pediatrics, Hiroshima University Graduate School of Biomedical and Health Sciences, Hiroshima, Japan.
Keisuke HamadaDepartment of Biochemistry, Yokohama City University, Yokohama, Japan.
Yoshiteru AzumaDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.
Kohei HamanakaDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.
Atsushi FujitaDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.
Eriko KoshimizuDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.
Satoko MiyatakeDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.ORCID http://orcid.org/0000-0001-7587-5168
Takeshi MizuguchiDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.ORCID http://orcid.org/0000-0003-4998-1244
Shintaro MakinoDepartment of Obstetrics and Gynecology, Juntendo University Urayasu Hospital, Chiba, Japan.ORCID http://orcid.org/0000-0003-0258-361X
Atsuo ItakuraDepartment of Obstetrics and Gynecology, Juntendo University, Tokyo, Japan.
Satoshi OkadaDepartment of Pediatrics, Hiroshima University Graduate School of Biomedical and Health Sciences, Hiroshima, Japan.
Nobuhiko OkamotoDepartment of Medical Genetics, Osaka Women's and Children's Hospital, Osaka, Japan.
Kazuhiro OgataDepartment of Biochemistry, Yokohama City University, Yokohama, Japan.
Yuri UchiyamaDepartment of Human Genetics, Yokohama City University, Yokohama, Japan.ORCID http://orcid.org/0000-0002-4540-5277
Naomichi MatsumotoDepartment of Human Genetics, Yokohama City University, Yokohama, Japan. naomat@yokohama-cu.ac.jp.ORCID http://orcid.org/0000-0001-9846-6500
Yokohama City University · JPHiroshima University · JPJuntendo University · JPYokohama City University Hospital · JPAichi Medical University · JPHigashihiroshima Medical Center · JPJuntendo University Urayasu Hospital · JPOsaka Women's and Children's Hospital · JP

Funding

Japan Agency for Medical Research and Development (AMED) JP21cm0106503Japan Agency for Medical Research and Development (AMED) JP21ek0109486Japan Agency for Medical Research and Development (AMED) JP21ek0109493Japan Agency for Medical Research and Development (AMED) JP21ek0109549MEXT | Japan Society for the Promotion of Science (JSPS) JP20K07907MEXT | Japan Society for the Promotion of Science (JSPS) JP20K08164MEXT | Japan Society for the Promotion of Science (JSPS) JP20K17428MEXT | Japan Society for the Promotion of Science (JSPS) JP21k15097
6 · The paper itself

Abstract

TET3 at 2p13.1 encodes tet methylcytosine dioxygenase 3, a demethylation enzyme that converts 5-methylcytosine to 5-hydroxymethylcytosine. Beck et al. reported that patients with TET3 abnormalities in either an autosomal dominant or recessive inheritance fashion clinically showed global developmental delay, intellectual disability, and dysmorphisms. In this study, exome sequencing identified both mono- and biallelic TET3 variants in two families: a de novo variant NM_001287491.1:c.3028 A > G:p.(Asn1010Asp), and compound heterozygous variants NM_001287491.1:c.[2077 C > T];[2896 T > G],p.[Gln693*];[Cys966Gly]. Despite the different inheritance modes, the affected individuals showed similar phenotypic features. Including these three patients, only 14 affected individuals have been reported to date. The accumulation of data regarding individuals with TET3-related disorder is necessary to describe their clinical spectrum.

Indexed as

Craniofacial AbnormalitiesDioxygenasesIntellectual DisabilityExome SequencingHumansDioxygenasesTET3 protein, human

Identifiers

PMID34719681
OpenAlexW3208385682

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.