Evidence map›Paper›PMID 34717971›Full record

ArticleJournal of molecular biology2022

Glycosylation and Serological Reactivity of an Expression-enhanced SARS-CoV-2 Viral Spike Mimetic.

Himanshi Chawla, Sian E Jossi, Sian E Faustini, Firdaus Samsudin, Joel D Allen, Yasunori Watanabe, Maddy L Newby, Edith Marcial-Juárez, Rachel E Lamerton, Jason S McLellan and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

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  13. Principles of SARS-CoV-2 glycosylation.Current opinion in structural biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Himanshi ChawlaSchool of Biological Sciences, University of Southampton, Southampton SO17 1BJ, UK.
Sian E JossiInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Sian E FaustiniInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Firdaus SamsudinBioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore 138671, Singapore.
Joel D AllenSchool of Biological Sciences, University of Southampton, Southampton SO17 1BJ, UK.
Yasunori WatanabeSchool of Biological Sciences, University of Southampton, Southampton SO17 1BJ, UK; Oxford Glycobiology Institute, Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK.
Maddy L NewbySchool of Biological Sciences, University of Southampton, Southampton SO17 1BJ, UK.
Edith Marcial-JuárezInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Rachel E LamertonInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Jason S McLellanDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712, USA.
Peter J BondBioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore 138671, Singapore; Department of Biological Sciences, National University of Singapore, Singapore 117543, Singapore.
Alex G RichterInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Adam F CunninghamInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Max CrispinSchool of Biological Sciences, University of Southampton, Southampton SO17 1BJ, UK. Electronic address: max.crispin@soton.ac.uk.
University of Birmingham · GBUniversity of Southampton · GBBioinformatics Institute · SGNational University of Singapore · SGThe University of Texas at Austin · USUniversity of Oxford · GB

Funding

Medical Research Council MR/N023706/1Wellcome Trust
6 · The paper itself

Abstract

Extensive glycosylation of viral glycoproteins is a key feature of the antigenic surface of viruses and yet glycan processing can also be influenced by the manner of their recombinant production. The low yields of the soluble form of the trimeric spike (S) glycoprotein from SARS-CoV-2 has prompted advances in protein engineering that have greatly enhanced the stability and yields of the glycoprotein. The latest expression-enhanced version of the spike incorporates six proline substitutions to stabilize the prefusion conformation (termed SARS-CoV-2 S HexaPro). Although the substitutions greatly enhanced expression whilst not compromising protein structure, the influence of these substitutions on glycan processing has not been explored. Here, we show that the site-specific N-linked glycosylation of the expression-enhanced HexaPro resembles that of an earlier version containing two proline substitutions (2P), and that both capture features of native viral glycosylation. However, there are site-specific differences in glycosylation of HexaPro when compared to 2P. Despite these discrepancies, analysis of the serological reactivity of clinical samples from infected individuals confirmed that both HexaPro and 2P protein are equally able to detect IgG, IgA, and IgM responses in all sera analysed. Moreover, we extend this observation to include an analysis of glycan engineered S protein, whereby all N-linked glycans were converted to oligomannose-type and conclude that serological activity is not impacted by large scale changes in glycosylation. These observations suggest that variations in glycan processing will not impact the serological assessments currently being performed across the globe.

Indexed as

Antibodies, ViralBinding SitesCOVID-19GlycosylationHumansImmunoglobulin AImmunoglobulin GImmunoglobulin MMannoseMutation, MissenseOligosaccharidesPolysaccharidesProlineRecombinant ProteinsSARS-CoV-2Spike Glycoprotein, CoronavirusAntibodies, ViralImmunoglobulin AImmunoglobulin GImmunoglobulin MMannoseOligosaccharidesPolysaccharidesProlineRecombinant ProteinsSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2antibodyglycoproteinglycosylationSARS-CoV-2serology

Identifiers

PMID34717971
PMCPMC8550889
OpenAlexW3209565368

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.