Evidence map›Paper›PMID 34716668›Full record

ArticleThe plant genome2022

Detection of rare nematode resistance Rhg1 haplotypes in Glycine soja and a novel Rhg1 α-SNAP.

Derrick J Grunwald, Ryan W Zapotocny, Seda Ozer, Brian W Diers, Andrew F Bent

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in The plant genome, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Gene Localization and Functional Validation ofPlants (Basel, Switzerland) · 2025
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Derrick J GrunwaldDep. of Plant Pathology, Univ. of Wisconsin-Madison, Madison, WI, 53706, USA.
Ryan W ZapotocnyDep. of Plant Pathology, Univ. of Wisconsin-Madison, Madison, WI, 53706, USA.
Seda OzerDep. of Crop Science, Univ. of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Brian W DiersDep. of Crop Science, Univ. of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.ORCID 0000-0003-3584-5495
Andrew F BentDep. of Plant Pathology, Univ. of Wisconsin-Madison, Madison, WI, 53706, USA.ORCID 0000-0001-6610-9525

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study pursued the hypothesis that wild plant germplasm accessions carrying alleles of interest can be identified using available single nucleotide polymorphism (SNP) genotypes for particular alleles of other (unlinked) genes that contribute to the trait of interest. The soybean cyst nematode (SCN, Heterodera glycines [HG]) resistance locus Rhg1 is widely used in farmed soybean [Glycine max (L.) Merr.]. The two known resistance-conferring haplotypes, rhg1-a and rhg1-b, typically contain three or seven to 10 tandemly duplicated Rhg1 segments, respectively. Each Rhg1 repeat carries four genes, including Glyma.18G022500, which encodes unusual isoforms of the vesicle-trafficking chaperone α-SNAP. Using SoySNP50K data for NSF

Indexed as

Disease ResistanceTylenchoideaAnimalsDNA Copy Number VariationsGlycineGlycine maxHaplotypesPlant BreedingPlant DiseasesSoluble N-Ethylmaleimide-Sensitive Factor Attachment ProteinsGlycineSoluble N-Ethylmaleimide-Sensitive Factor Attachment Proteins

Identifiers

PMID34716668
PMCPMC12807349

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.