Evidence map›Paper›PMID 34714718›Full record

ArticleBioengineered2021

The landscape of DNA methylation in asthma: a data mining and validation.

Hui Yang, Fei-Yang Na, Li Guo, Xuan Liang, Rong-Fang Zhang

Open access · goldAbstract readValidation Study
In one paragraph

Article in Bioengineered, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hui YangThe Area B of International Medical Department, Gansu Provincial Maternity and Child-care Hospital, Lanzhou, Gansu, People's Republic of China.
Fei-Yang NaThe Area B of International Medical Department, Gansu Provincial Maternity and Child-care Hospital, Lanzhou, Gansu, People's Republic of China.
Li GuoThe Area B of International Medical Department, Gansu Provincial Maternity and Child-care Hospital, Lanzhou, Gansu, People's Republic of China.
Xuan LiangThe Area B of International Medical Department, Gansu Provincial Maternity and Child-care Hospital, Lanzhou, Gansu, People's Republic of China.
Rong-Fang ZhangThe Area B of International Medical Department, Gansu Provincial Maternity and Child-care Hospital, Lanzhou, Gansu, People's Republic of China.ORCID 0000-0001-8244-872X
Gansu Provincial Maternal and Child Health Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human asthma is caused by interactions between a range of genetic and environmental factors. However, the specific pathogenesis of asthma remains controversial. This study explored the contribution of DNA methylation to asthma using computer learning methods. Relevant datasets and information related to patients with asthma were collected from the Gene Expression Omnibus (GEO) database. A multivariate linear regression model was established. Differentially expressed genes and DNA methylation sites were identified. The results showed that the expression of 169 genes was significantly different between the two groups. Through differential analysis of methylation and differential analysis of gene expression, 44 differentially expressed genes that may be affected by DNA methylation modification were identified. The results of the multiple linear regression model showed that DNA methylation could explain 9.81% of the variation in gene expression. Gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses showed that the differentially expressed genes,

Indexed as

Data MiningAsthmaChromosomes, HumanDNA MethylationGene Expression ProfilingGene Expression RegulationGene OntologyHLA-D AntigensHumansMolecular Sequence AnnotationHLA-D AntigensHLA-DM antigensAsthmabiomarkerDNA methylationHLA-DMB

Identifiers

PMID34714718
PMCPMC8809922
OpenAlexW3211237270

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.