Evidence map›Paper›PMID 34714176›Full record

ArticlePhysiological genomics2021

Reconstitution of the host holobiont in germ-free born male rats acutely increases bone growth and affects marrow cellular content.

Piotr J Czernik, Rachel M Golonka, Saroj Chakraborty, Beng San Yeoh, Ahmed A Abokor, Piu Saha, Ji-Youn Yeo, Blair Mell, Xi Cheng, Sudipta Baroi and 5 more

Open access · greenAbstract read
In one paragraph

Article in Physiological genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

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  8. Report From the 6Frontiers in endocrinology · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Piotr J CzernikMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.
Rachel M GolonkaMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.
Saroj ChakrabortyMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.ORCID 0000-0002-8728-8187
Beng San YeohMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.ORCID 0000-0002-7723-8733
Ahmed A AbokorMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.ORCID 0000-0001-8876-4969
Piu SahaMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.
Ji-Youn YeoMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.
Blair MellMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.
Xi ChengMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.ORCID 0000-0002-0838-5094
Sudipta BaroiDepartment of Orthopedic Surgery, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.
Yuan TianDepartment of Veterinary and Biomedical Sciences, The Pennsylvania State University, University Park, Pennsylvania.
Andrew D PattersonDepartment of Veterinary and Biomedical Sciences, The Pennsylvania State University, University Park, Pennsylvania.
Bina JoeMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.ORCID 0000-0002-2385-7061
Matam Vijay-KumarMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.ORCID 0000-0002-8732-0167
Beata Lecka-CzernikMicrobiome Consortium, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.ORCID 0000-0002-1216-9634
University of Toledo · USPennsylvania State University · US

Funding

Interplay between Dietary Fiber and Gut Microbiota in Hepatocellular CarcinomaR01CA219144 · NCI · UNIVERSITY OF TOLEDO HEALTH SCI CAMPUS · PI VIJAY-KUMAR, MATAM · 2017 to 2021
$1.6M
NCI NIH HHS R01 CA219144
6 · The paper itself

Abstract

Integration of microbiota in a host begins at birth and progresses during adolescence, forming a multidirectional system of physiological interactions. Here, we present an instantaneous effect of natural, bacterial gut colonization on the acceleration of longitudinal and radial bone growth in germ-free born, 7-wk-old male rats. Changes in bone mass and structure were analyzed after 10 days following the onset of colonization through cohousing with conventional rats and revealed unprecedented acceleration of bone accrual in cortical and trabecular compartments, increased bone tissue mineral density, improved proliferation and hypertrophy of growth plate chondrocytes, bone lengthening, and preferential deposition of periosteal bone in the tibia diaphysis. In addition, the number of small in size adipocytes increased, whereas the number of megakaryocytes decreased, in the bone marrow of conventionalized germ-free rats indicating that not only bone mass but also bone marrow environment is under control of gut microbiota signaling. The changes in bone status paralleled with a positive shift in microbiota composition toward short-chain fatty acids (SCFA)-producing microbes and a considerable increase in cecal SCFA concentrations, specifically butyrate. Furthermore, reconstitution of the host holobiont increased hepatic expression of IGF-1 and its circulating levels. Elevated serum levels of 25-hydroxy vitamin D and alkaline phosphatase pointed toward an active process of bone formation. The acute stimulatory effect on bone growth occurred independently of body mass increase. Overall, the presented model of conventionalized germ-free rats could be used to study microbiota-based therapeutics for combatting dysbiosis-related bone disorders.

Indexed as

Germ-Free LifeAdipocytesAnimalsBacteriaBone DensityBone DevelopmentBone Marrow CellsCell ProliferationChondrocytesCoprophagiaDysbiosisFatty Acids, VolatileFecesGastrointestinal MicrobiomeHost Microbial InteractionsMaleFatty Acids, VolatileRNA, Ribosomal, 16Sbonebone marrow adipocytesgut microbiomeIGF-1short-chain fatty acids

Identifiers

PMID34714176
PMCPMC8714805
OpenAlexW3209942814

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.