Evidence map›Paper›PMID 34712231›Full record

ArticleFrontiers in immunology2021

Inverted CD8 T-Cell Exhaustion and Co-Stimulation Marker Balance Differentiate Aviremic HIV-2-Infected From Seronegative Individuals.

Lydia Scharf, Christina B Pedersen, Emil Johansson, Jacob Lindman, Lars R Olsen, Marcus Buggert, Sten Wilhelmson, Fredrik Månsson, Joakim Esbjörnsson, Antonio Biague and 5 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Role of CXCR5Frontiers in microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Lydia ScharfDepartment of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden.
Christina B PedersenSection for Bioinformatics, Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.
Emil JohanssonDepartment of Laboratory Medicine, Lund University, Lund, Sweden.
Jacob LindmanDepartment of Clinical Sciences Lund, Lund University, Lund, Sweden.
Lars R OlsenSection for Bioinformatics, Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.
Marcus BuggertCenter for Infectious Medicine, Department of Medicine Huddinge, Karolinska Institutet, Stockholm, Sweden.
Sten WilhelmsonDepartment of Clinical Sciences Lund, Lund University, Lund, Sweden.
Fredrik MånssonDepartment of Translational Medicine, Lund University, Lund, Sweden.
Joakim EsbjörnssonDepartment of Translational Medicine, Lund University, Lund, Sweden.
Antonio BiagueNational Laboratory for Public Health, Bissau, Guinea-Bissau.
Patrik MedstrandDepartment of Translational Medicine, Lund University, Lund, Sweden.
Hans NorrgrenDepartment of Clinical Sciences Lund, Lund University, Lund, Sweden.
Annika C KarlssonDepartment of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden.
Marianne JanssonDepartment of Laboratory Medicine, Lund University, Lund, Sweden.
SWEGUB CORE Group
Lund University · SEKarolinska Institutet · SECopenhagen University Hospital · DKNational Institute of Public Health · GWTechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HIV-2 is less pathogenic compared to HIV-1. Still, disease progression may develop in aviremic HIV-2 infection, but the driving forces and mechanisms behind such development are unclear. Here, we aimed to reveal the immunophenotypic pattern associated with CD8 T-cell pathology in HIV-2 infection, in relation to viremia and markers of disease progression. The relationships between pathological differences of the CD8 T-cell memory population and viremia were analyzed in blood samples obtained from an occupational cohort in Guinea-Bissau, including HIV-2 viremic and aviremic individuals. For comparison, samples from HIV-1- or dually HIV-1/2-infected and seronegative individuals were obtained from the same cohort. CD8 T-cell exhaustion was evaluated by the combined expression patterns of activation, stimulatory and inhibitory immune checkpoint markers analyzed using multicolor flow cytometry and advanced bioinformatics. Unsupervised multidimensional clustering analysis identified a cluster of late differentiated CD8 T-cells expressing activation (CD38+, HLA-DR

Indexed as

AdultCD8-Positive T-LymphocytesFemaleHIV-2HIV InfectionsHIV SeronegativityHumansImmunosenescenceMaleMiddle AgedViremiaaviremicCD226CD8 T cell phenotypescostimulationHIV-2immune activationT cell exhaustionTIGIT

Identifiers

PMID34712231
PMCPMC8545800
OpenAlexW3205946294

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.