Evidence map›Paper›PMID 34711851›Full record

ArticleScientific data2021

Extracellular circular RNA profiles in plasma and urine of healthy, male college athletes.

Elizabeth Hutchins, Rebecca Reiman, Joseph Winarta, Taylor Beecroft, Ryan Richholt, Matt De Both, Khalouk Shahbander, Elizabeth Carlson, Alex Janss, Ashley Siniard and 9 more

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Trial
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  5. Article
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  7. Circular RNAs: Biomarkers of cancer.Cancer innovation · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 1 country.

Elizabeth HutchinsNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.ORCID 0000-0003-2543-0798
Rebecca ReimanNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Joseph WinartaNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Taylor BeecroftNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Ryan RichholtNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Matt De BothNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Khalouk ShahbanderNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Elizabeth CarlsonNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Alex JanssNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Ashley SiniardNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Chris BalakNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Ryan BruhnsNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Timothy G WhitsettNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Roger McCoyArizona State University Sports Medicine, 323 E Veterans Way, Tempe, AZ, 85281, USA.
Matthew AnastasiArizona State University Sports Medicine, 323 E Veterans Way, Tempe, AZ, 85281, USA.
April AllenNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Brian ChurasNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Matthew HuentelmanNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA.
Kendall Van Keuren-JensenNeurogenomics Division, TGen, 445 N. 5th St., Phoenix, AZ, 85004, USA. kjensen@tgen.org.
Translational Genomics Research Institute · USArizona State University · US

Funding

exRNA signatures Predict Outcomes after brain injuryUH3TR000891 · NCATS · TRANSLATIONAL GENOMICS RESEARCH INST · PI ADELSON, P. DAVID, HUENTELMAN, MATT · 2015 to 2017
$3.0M
Optimization and Normalization Studies for CSF as a BiomarkerUH2TR000891 · NCATS · TRANSLATIONAL GENOMICS RESEARCH INST · PI ADELSON, P. DAVID, HUENTELMAN, MATT · 2013 to 2014
$1.1M
NCATS NIH HHS UH2 TR000891NCATS NIH HHS UH3 TR000891
6 · The paper itself

Abstract

Circular RNA (circRNA) are a recently discovered class of RNA characterized by a covalently-bonded back-splice junction. As circRNAs are inherently more stable than other RNA species, they may be detected extracellularly in peripheral biofluids and provide novel biomarkers. While circRNA have been identified previously in peripheral biofluids, there are few datasets for circRNA junctions from healthy controls. We collected 134 plasma and 114 urine samples from 54 healthy, male college athlete volunteers, and used RNASeq to determine circRNA content. The intersection of six bioinformatic tools identified 965 high-confidence, characteristic circRNA junctions in plasma and 72 in urine. Highly-expressed circRNA junctions were validated by qRT-PCR. Longitudinal samples were collected from a subset, demonstrating circRNA expression was stable over time. Lastly, the ratio of circular to linear transcripts was higher in plasma than urine. This study provides a valuable resource for characterization of circRNA in plasma and urine from healthy volunteers, one that can be developed and reassessed as researchers probe the circRNA contents of biofluids across physiological changes and disease states.

Indexed as

AthletesAdolescentHealthy VolunteersHumansMaleRNA, CircularRNA-SeqYoung AdultRNA, Circular

Identifiers

PMID34711851
PMCPMC8553830
OpenAlexW3209452951

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.