Evidence map›Paper›PMID 34710325›Full record

ArticleJournal of medicinal chemistry2021

Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors.

Rezaul Md Karim, Melissa J Bikowitz, Alice Chan, Jin-Yi Zhu, Dylan Grassie, Andreas Becker, Norbert Berndt, Steven Gunawan, Nicholas J Lawrence, Ernst Schönbrunn

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Rezaul Md KarimDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.
Melissa J BikowitzDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.ORCID 0000-0003-4985-3461
Alice ChanDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.
Jin-Yi ZhuDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.
Dylan GrassieDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.
Andreas BeckerChemical Biology Core, Moffitt Cancer Center, Tampa, Florida 33612, United States.
Norbert BerndtDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.
Steven GunawanDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.
Nicholas J LawrenceDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.
Ernst SchönbrunnDrug Discovery Department, Moffitt Cancer Center, Tampa, Florida 33612, United States.ORCID 0000-0002-3589-3510
Moffitt Cancer Center · USUniversity of South Florida · US

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI John L. Cleveland · 1998 to 2026
$93.5M
Understanding Behavioral Patterns in Contraceptive UseU54HD093540 · NICHD · UNIVERSITY OF MINNESOTA · PI GEORG, GUNDA I. · 2017 to 2018
$4.4M
Understanding Behavioral Patterns in Contraceptive UseP50HD093540 · NICHD · UNIVERSITY OF MINNESOTA · PI GEORG, GUNDA I. · 2019 to 2020
$3.9M
NCI NIH HHS P30 CA076292NICHD NIH HHS P50 HD093540NICHD NIH HHS U54 HD093540
6 · The paper itself

Abstract

BRD4 and other members of the bromodomain and extraterminal (BET) family of proteins are promising epigenetic targets for the development of novel therapeutics. Among the reported BRD4 inhibitors are dihydropteridinones and benzopyrimidodiazepinones originally designed to target the kinases PLK1, ERK5, and LRRK2. While these kinase inhibitors were identified as BRD4 inhibitors, little is known about their binding potential and structural details of interaction with the other BET bromodomains. We comprehensively characterized a series of known and newly identified dual BRD4-kinase inhibitors against all eight individual BET bromodomains. A detailed analysis of 23 novel cocrystal structures of BET-kinase inhibitor complexes in combination with direct binding assays and cell signaling studies revealed significant differences in molecular shape complementarity and inhibitory potential. Collectively, the data offer new insights into the action of kinase inhibitors across BET bromodomains, which may aid the development of drugs to inhibit certain BET proteins and kinases differentially.

Indexed as

Bromodomain Containing ProteinsCell Cycle ProteinsCrystallography, X-RayHEK293 CellsHumansMolecular Docking SimulationProtein BindingProtein ConformationProtein DomainsProtein Kinase InhibitorsTranscription FactorsBRD4 protein, humanBromodomain Containing ProteinsCell Cycle ProteinsProtein Kinase InhibitorsTranscription Factors

Identifiers

PMID34710325
PMCPMC9119049
OpenAlexW3210641718

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.