Evidence map›Paper›PMID 34704096›Full record

ArticlemedRxiv : the preprint server for health sciences2023

Wastewater and surface monitoring to detect COVID-19 in elementary school settings: The Safer at School Early Alert project.

Rebecca Fielding-Miller, Smruthi Karthikeyan, Tommi Gaines, Richard S Garfein, Rodolfo A Salido, Victor J Cantu, Laura Kohn, Natasha K Martin, Adriane Wynn, Carrissa Wijaya and 35 more

Open access · greenAbstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 22 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

45 authors at 6 institutions in 1 country.

Rebecca Fielding-MillerUniversity of California San Diego, School of Medicine, Division of Infectious Disease and Global Public Health.
Smruthi KarthikeyanUniversity of California San Diego, Department of Pediatrics.
Tommi GainesUniversity of California San Diego, School of Medicine, Division of Infectious Disease and Global Public Health.
Richard S GarfeinUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Rodolfo A SalidoUniversity of California San Diego, Department of Bioengineering.
Victor J CantuUniversity of California San Diego, Department of Bioengineering.
Laura KohnKohn education consulting.
Natasha K MartinUniversity of California San Diego, School of Medicine, Division of Infectious Disease and Global Public Health.
Adriane WynnUniversity of California San Diego, School of Medicine, Division of Infectious Disease and Global Public Health.
Carrissa WijayaUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Marlene FloresUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Vinton OmalekiUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Araz MajnoonianUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Patricia Gonzalez-ZunigaUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Megan NguyenUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Anh V VoUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Tina LeUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Dawn DuongUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Ashkan HassaniUniversity of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science.
Samantha TweetenCounty of San Diego, Health and Human Services Agency.
Kristen JepsenUniversity of California San Diego, Institute for Genomic Medicine.
Benjamin HensonUniversity of California San Diego, Institute for Genomic Medicine.
Abbas HakimUniversity of California San Diego, Department of Obstetrics Gynecology and Reproductive Sciences.
Amanda BirminghamUniversity of California San Diego, Center for Computational Biology & Bioinformatics.
Peter De HoffUniversity of California San Diego, Department of Pediatrics.
Adam M MarkUniversity of California San Diego, Center for Computational Biology & Bioinformatics.
Chanond A NasamranUniversity of California San Diego, Center for Computational Biology & Bioinformatics.
Sara Brin RosenthalUniversity of California San Diego, Center for Computational Biology & Bioinformatics.
Niema MoshiriUniversity of California San Diego, Department of Computer Science & Engineering.
Kathleen M FischUniversity of California San Diego, Department of Obstetrics Gynecology and Reproductive Sciences.
Greg HumphreyUniversity of California San Diego, Department of Pediatrics.
Sawyer FarmerUniversity of California San Diego, Department of Pediatrics.
Helena M TubbUniversity of California San Diego, Department of Pediatrics.
Tommy VallesUniversity of California San Diego, Department of Pediatrics.
Justin MorrisUniversity of California San Diego, Department of Computer Science & Engineering.
Jaeyoung KangUniversity of California San Diego, Department of Electrical and Computer Engineering.
Behnam KhaleghiUniversity of California San Diego, Department of Computer Science & Engineering.
Colin YoungUniversity of California San Diego, Department of Computer Science & Engineering.
Ameen D AkelMicron Technology, Inc.
Sean EilertMicron Technology, Inc.
Justin EnoMicron Technology, Inc.
Ken CurewitzMicron Technology, Inc.
Louise C LaurentUniversity of California San Diego and San Diego State University Joint Doctoral Program in Public Health.
Tajana RosingUniversity of California San Diego, Department of Computer Science & Engineering.
Rob KnightUniversity of California San Diego, Department of Pediatrics.
University of California San Diego · USMicron (United States) · USUniversity of California System · USSan Diego State University · USJohns Hopkins University · USHealth and Human Services Agency · US

Funding

UC San Diego Clinical and Translational Research InstituteUL1TR001442 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S, HOGARTH, MICHAEL · 2015 to 2024
$88.3M
Social-structural and spatial determinants of HIV testing and linkage to care among high risk women in TanzaniaK01MH112436 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIELDING-MILLER, REBECCA KATHLEEN · 2017 to 2021
$941k
Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
NCATS NIH HHS UL1 TR001442NIH HHS S10 OD026929NIMH NIH HHS K01 MH112436
6 · The paper itself

Abstract

Background: Schools are high-risk settings for SARS-CoV-2 transmission, but necessary for children's educational and social-emotional wellbeing. Previous research suggests that wastewater monitoring can detect SARS-CoV-2 infections in controlled residential settings with high levels of accuracy. However, its effective accuracy, cost, and feasibility in non-residential community settings is unknown. Methods: The objective of this study was to determine the effectiveness and accuracy of community-based passive wastewater and surface (environmental) surveillance to detect SARS-CoV-2 infection in neighborhood schools compared to weekly diagnostic (PCR) testing. We implemented an environmental surveillance system in nine elementary schools with 1700 regularly present staff and students in southern California. The system was validated from November 2020 - March 2021. Findings: In 447 data collection days across the nine sites 89 individuals tested positive for COVID-19, and SARS-CoV-2 was detected in 374 surface samples and 133 wastewater samples. Ninety-three percent of identified cases were associated with an environmental sample (95% CI: 88% - 98%); 67% were associated with a positive wastewater sample (95% CI: 57% - 77%), and 40% were associated with a positive surface sample (95% CI: 29% - 52%). The techniques we utilized allowed for near-complete genomic sequencing of wastewater and surface samples. Interpretation: Passive environmental surveillance can detect the presence of COVID-19 cases in non-residential community school settings with a high degree of accuracy. Funding: County of San Diego, Health and Human Services Agency, National Institutes of Health, National Science Foundation, Centers for Disease Control.

Identifiers

PMID34704096
PMCPMC8547528
OpenAlexW3207868448

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.