Evidence map›Paper›PMID 34702830›Full record

ArticleNature communications2021

Miniature type V-F CRISPR-Cas nucleases enable targeted DNA modification in cells.

Greta Bigelyte, Joshua K Young, Tautvydas Karvelis, Karolina Budre, Rimante Zedaveinyte, Vesna Djukanovic, Elizabeth Van Ginkel, Sushmitha Paulraj, Stephen Gasior, Spencer Jones and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 117 citations in OpenAlex.

  1. Article
  2. Strategy for enhanced production of A40926B0 inSynthetic and systems biotechnology · 2027
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Wheat's Up with CRISPR-Cas-Current Advances, Obstacles and Perspectives.International journal of molecular sciences · 2026
    Review
  8. Article
  9. Article
  10. Article
  11. From Lab to Field: CRISPRing Major CultivatedInternational journal of molecular sciences · 2026
    Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 3 institutions in 3 countries.

Greta Bigelyte *Institute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania.ORCID 0000-0002-1432-1433
Joshua K Young *Molecular Engineering, Corteva Agriscience™, Johnston, IA, USA. josh.young@corteva.com.ORCID 0000-0002-6237-8020
Tautvydas Karvelis *Institute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania. tautvydas.karvelis@bti.vu.lt.ORCID 0000-0002-0685-2947
Karolina BudreInstitute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania.
Rimante ZedaveinyteInstitute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania.ORCID 0000-0002-0738-6976
Vesna DjukanovicMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Elizabeth Van GinkelMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Sushmitha PaulrajMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Stephen GasiorMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Spencer JonesMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Lanie FeigenbutzMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Grace St ClairMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Pierluigi BaroneMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.ORCID 0000-0002-2579-0913
Jennifer BohnMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Ananta AcharyaMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Gina Zastrow-HayesMolecular Engineering, Corteva Agriscience™, Johnston, IA, USA.
Selgar Henkel-HeineckeInstitute of Experimental Physics, Leipzig University, Leipzig, Germany.
Arunas SilanskasInstitute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania.
Ralf SeidelInstitute of Experimental Physics, Leipzig University, Leipzig, Germany.
Virginijus SiksnysInstitute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania. siksnys@ibt.lt.ORCID 0000-0003-1983-2096
Corteva (United States) · USVilnius University · LTLeipzig University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Class 2 CRISPR systems are exceptionally diverse, nevertheless, all share a single effector protein that contains a conserved RuvC-like nuclease domain. Interestingly, the size of these CRISPR-associated (Cas) nucleases ranges from >1000 amino acids (aa) for Cas9/Cas12a to as small as 400-600 aa for Cas12f. For in vivo genome editing applications, compact RNA-guided nucleases are desirable and would streamline cellular delivery approaches. Although miniature Cas12f effectors have been shown to cleave double-stranded DNA, targeted DNA modification in eukaryotic cells has yet to be demonstrated. Here, we biochemically characterize two miniature type V-F Cas nucleases, SpCas12f1 (497 aa) and AsCas12f1 (422 aa), and show that SpCas12f1 functions in both plant and human cells to produce targeted modifications with outcomes in plants being enhanced with short heat pulses. Our findings pave the way for the development of miniature Cas12f1-based genome editing tools.

Indexed as

Gene EditingBacillalesCRISPR-Associated ProteinsCRISPR-Cas SystemsDNAEndodeoxyribonucleasesEubacterialesHEK293 CellsHumansPlant CellsProtein MultimerizationRibonucleoproteinsRNA, Guide, CRISPR-Cas SystemsZea maysCRISPR-Associated ProteinsDNAEndodeoxyribonucleasesRibonucleoproteinsRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID34702830
PMCPMC8548392
OpenAlexW3210235422

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.