Evidence map›Paper›PMID 34699683›Full record

ArticleChembiochem : a European journal of chemical biology2022

Scalable and Selective β-Hydroxy-α-Amino Acid Synthesis Catalyzed by Promiscuous l-Threonine Transaldolase ObiH.

Tyler J Doyon, Prasanth Kumar, Sierra Thein, Maeve Kim, Abigail Stitgen, Abbigail M Grieger, Cormac Madigan, Patrick H Willoughby, Andrew R Buller

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Tyler J DoyonDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0002-6885-7487
Prasanth KumarDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0001-6175-4883
Sierra TheinDepartment of Chemistry, Ripon College, Ripon, WI 54971, USA.
Maeve KimDepartment of Chemistry, Ripon College, Ripon, WI 54971, USA.
Abigail StitgenDepartment of Chemistry, Ripon College, Ripon, WI 54971, USA.
Abbigail M GriegerDepartment of Chemistry, Ripon College, Ripon, WI 54971, USA.
Cormac MadiganDepartment of Chemistry, Ripon College, Ripon, WI 54971, USA.
Patrick H WilloughbyDepartment of Chemistry, Ripon College, Ripon, WI 54971, USA.
Andrew R BullerDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0002-9635-4844
Ripon College · USUniversity of Wisconsin–Madison · US

Funding

Engineering in vivo biomolecular synthesis with non-standard building blocksDP2GM137417 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BULLER, ANDREW · 2019 to 2019
$2.2M
NIGMS NIH HHS DP2 GM137417NSF #CHE-1919350Office of the Vice Chancellor for Research and Graduate Education at the University of Wisconsin-MadisonWisconsin Alumni Research Foundation
6 · The paper itself

Abstract

Enzymes from secondary metabolic pathways possess broad potential for the selective synthesis of complex bioactive molecules. However, the practical application of these enzymes for organic synthesis is dependent on the development of efficient, economical, operationally simple, and well-characterized systems for preparative scale reactions. We sought to bridge this knowledge gap for the selective biocatalytic synthesis of β-hydroxy-α-amino acids, which are important synthetic building blocks. To achieve this goal, we demonstrated the ability of ObiH, an l-threonine transaldolase, to achieve selective milligram-scale synthesis of a diverse array of non-standard amino acids (nsAAs) using a scalable whole cell platform. We show how the initial selectivity of the catalyst is high and how the diastereomeric ratio of products decreases at high conversion due to product re-entry into the catalytic cycle. ObiH-catalyzed reactions with a variety of aromatic, aliphatic and heterocyclic aldehydes selectively generated a panel of β-hydroxy-α-amino acids possessing broad functional-group diversity. Furthermore, we demonstrated that ObiH-generated β-hydroxy-α-amino acids could be modified through additional transformations to access important motifs, such as β-chloro-α-amino acids and substituted α-keto acids.

Indexed as

Amino AcidsCatalysisChromatography, LiquidCrystallography, X-RayMass SpectrometryMolecular StructureStereoisomerismThreonineTransaldolaseAmino AcidsThreonineTransaldolasebiocatalysisC−C bond formationenzyme catalysispyridoxal phosphatethreonine transaldolases

Identifiers

PMID34699683
PMCPMC8796315
OpenAlexW3208701734

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.