Evidence map›Paper›PMID 34699345›Full record

ArticleMicrobial genomics2021

Differential nasopharyngeal microbiota composition in children according to respiratory health status.

Desiree Henares, Pedro Brotons, Mariona F de Sevilla, Ana Fernandez-Lopez, Susanna Hernandez-Bou, Amaresh Perez-Argüello, Alex Mira, Carmen Muñoz-Almagro, Raul Cabrera-Rubio

Abstract read
In one paragraph

Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Desiree HenaresInstitut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
Pedro BrotonsInstitut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
Mariona F de SevillaCIBER Center for Epidemiology and Public Health (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.
Ana Fernandez-LopezPediatric Department, Hospital Sant Joan de Deu, Barcelona, Spain.
Susanna Hernandez-BouPediatric Emergency Department, Hospital Sant Joan de Deu, Barcelona, Spain.
Amaresh Perez-ArgüelloInstitut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
Alex MiraCIBER Center for Epidemiology and Public Health (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.
Carmen Muñoz-AlmagroInstitut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
Raul Cabrera-RubioTeagasc Food Research Centre (TEAGASC), Moorepark, Fermoy, Cork, Ireland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute respiratory infections (ARIs) constitute one of the leading causes of antibiotic administration, hospitalization and death among children <5 years old. The upper respiratory tract microbiota has been suggested to explain differential susceptibility to ARIs and modulate ARI severity. The aim of the present study was to investigate the relation of nasopharyngeal microbiota and other microbiological parameters with respiratory health and disease, and to assess nasopharyngeal microbiota diagnostic utility for discriminating between different respiratory health statuses. We conducted a prospective case-control study at Hospital Sant Joan de Deu (Barcelona, Spain) from 2014 to 2018. This study included three groups of children <18 years with gradual decrease of ARI severity: cases with invasive pneumococcal disease (IPD) (representative of lower respiratory tract infections and systemic infections), symptomatic controls with mild viral upper respiratory tract infections (URTI), and healthy/asymptomatic controls according to an approximate case-control ratio 1:2. Nasopharyngeal samples were collected from participants for detection, quantification and serotyping of pneumococcal DNA, viral DNA/RNA detection and 16S rRNA gene sequencing. Microbiological parameters were included on case-control classification models. A total of 140 subjects were recruited (IPD=27, URTI=48, healthy/asymptomatic control=65). Children's nasopharyngeal microbiota composition varied according to respiratory health status and infection severity. The IPD group was characterized by overrepresentation of

Indexed as

Health StatusMicrobiotaAdolescentBacteriaCarnobacteriaceaeCase-Control StudiesChildChild, PreschoolFemaleHumansMaleMoraxellaNasopharynxPneumococcal InfectionsProspective StudiesRespiratory SystemRNA, Ribosomal, 16SchildrenDolosigranulumIPDmicrobiota-based diagnosticsnasopharyngeal microbiotaviral URTIs

Identifiers

PMID34699345
PMCPMC8627214

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.