Evidence map›Paper›PMID 34698546›Full record

ArticlemSystems2021

Building Natural Product Libraries Using Quantitative Clade-Based and Chemical Clustering Strategies.

Victoria M Anderson, Karen L Wendt, Fares Z Najar, Laura-Isobel McCall, Robert H Cichewicz

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in mSystems, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Rationally Minimizing Natural Product Libraries Using Mass Spectrometry.bioRxiv : the preprint server for biology · 2024
    Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Victoria M AndersonNatural Products Discovery Group, University of Oklahomagrid.266900.b, Norman, Oklahoma, USA.
Karen L WendtNatural Products Discovery Group, University of Oklahomagrid.266900.b, Norman, Oklahoma, USA.
Fares Z NajarDepartment of Chemistry and Biochemistry, University of Oklahomagrid.266900.b, Norman, Oklahoma, USA.
Laura-Isobel McCallDepartment of Chemistry and Biochemistry, University of Oklahomagrid.266900.b, Norman, Oklahoma, USA.ORCID 0000-0002-1243-8953
Robert H CichewiczNatural Products Discovery Group, University of Oklahomagrid.266900.b, Norman, Oklahoma, USA.ORCID 0000-0003-0744-4117
University of Oklahoma · US

Funding

UC San Diego RAPID Faculty Development Program in Infectious DiseasesR25AI147376 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADRIANA H TREMOULET, Joann Trejo · 2020 to 2026
$2.5M
NIAID NIH HHS R25 AI147376
6 · The paper itself

Abstract

The success of natural product-based drug discovery is predicated on having chemical collections that offer broad coverage of metabolite diversity. We propose a simple set of tools combining genetic barcoding and metabolomics to help investigators build natural product libraries aimed at achieving predetermined levels of chemical coverage. It was found that such tools aided in identifying overlooked pockets of chemical diversity within taxa, which could be useful for refocusing collection strategies. We have used fungal isolates identified as

Indexed as

chemical diversitydrug discoveryfungiLC-MS metabolomicslibrary designmetabolomicsnatural products

Identifiers

PMID34698546
PMCPMC8547436
OpenAlexW3210763141

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.