Evidence map›Paper›PMID 34698433›Full record

ArticleEMBO reports2021

F-domain valency determines outcome of signaling through the angiopoietin pathway.

Yan Ting Zhao, Jorge A Fallas, Shally Saini, George Ueda, Logeshwaran Somasundaram, Ziben Zhou, Infencia Xavier Raj, Chunfu Xu, Lauren Carter, Samuel Wrenn and 4 more

Open access · greenAbstract read
In one paragraph

Article in EMBO reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
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  9. Next-generation direct reprogramming.Frontiers in cell and developmental biology · 2024
    Review
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  18. Designed proteins assemble antibodies into modular nanocages.bioRxiv : the preprint server for biology · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Yan Ting Zhao *Department of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0001-9230-7066
Jorge A Fallas *Department of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-1431-820X
Shally SainiDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-0430-8788
George UedaDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-9792-7149
Logeshwaran SomasundaramDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0003-1924-8156
Ziben ZhouDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0001-8829-5330
Infencia Xavier RajDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-4889-4643
Chunfu XuDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-8668-0566
Lauren CarterDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-9837-9068
Samuel WrennDepartment of Biochemistry, University of Washington, Seattle, WA, USA.
Julie MathieuInstitute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.ORCID 0000-0002-3826-3549
Drew L SellersInstitute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.ORCID 0000-0003-1799-5908
David BakerDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0001-7896-6217
Hannele Ruohola-BakerDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-5588-4531
University of Washington · US

Funding

Progenitor Cell Biology Consortium Administrative Coordinating CenterU01HL099997 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI TERRIN, MICHAEL L · 2009 to 2015
$29.9M
Self Renewal and Differentiation of Human Embryonic Stem CellsP01GM081619 · NIGMS · UNIVERSITY OF WASHINGTON · PI WARE, CAROL B · 2007 to 2017
$20.6M
NRSA Training CoreTL1TR002318 · NCATS · UNIVERSITY OF WASHINGTON · PI Megan Moore · 2017 to 2026
$8.4M
Controlling Hematopoietic Lineage Commitment from ESC to PlateletsU01HL099993 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI TOROK-STORB, BEVERLY J. · 2009 to 2015
$8.3M
Comprehensive Training in Inter-Disciplinary Oral Health ResearchT90DE021984 · NIDCR · UNIVERSITY OF WASHINGTON · PI Robert Aaron Cornell · 2012 to 2026
$7.9M
Multimeric Peptide Copolymer Formulations for Targeted Drug Delivery to Treat Nervous System DisordersR01NS118247 · NINDS · UNIVERSITY OF WASHINGTON · PI SELLERS, DREW L · 2020 to 2024
$1.8M
MicroRNA Function in Human Embryonic Stem CellsR01GM083867 · NIGMS · UNIVERSITY OF WASHINGTON · PI RUOHOLA-BAKER, HANNELE · 2008 to 2011
$1.5M
Acquisition of Embryonic Stem Cell Metabolic Signature - Minority SupplementR01GM097372 · NIGMS · UNIVERSITY OF WASHINGTON · PI RUOHOLA-BAKER, HANNELE · 2011 to 2014
$1.3M
Targeting Ligands for autonomic uptake and drug delivery to the brain and spinal cordR21NS099654 · NINDS · UNIVERSITY OF WASHINGTON · PI SELLERS, DREW L · 2017 to 2018
$427k
NCATS NIH HHS TL1 TR002318NHLBI NIH HHS U01 HL099993NHLBI NIH HHS U01 HL099997NIDCR NIH HHS T90 DE021984NIGMS NIH HHS P01 GM081619NIGMS NIH HHS R01 GM083867NIGMS NIH HHS R01 GM097372NINDS NIH HHS R01 NS118247NINDS NIH HHS R21 NS099654
6 · The paper itself

Abstract

Angiopoietins 1 and 2 (Ang1 and Ang2) regulate angiogenesis through their similar F-domains by activating Tie2 receptors on endothelial cells. Despite the similarity in the underlying receptor-binding interaction, the two angiopoietins have opposite effects: Ang1 induces phosphorylation of AKT, strengthens cell-cell junctions, and enhances endothelial cell survival while Ang2 can antagonize these effects, depending on cellular context. To investigate the molecular basis for the opposing effects, we examined the phenotypes of a series of computationally designed protein scaffolds presenting the Ang1 F-domain in a wide range of valencies and geometries. We find two broad phenotypic classes distinguished by the number of presented F-domains: Scaffolds presenting 3 or 4 F-domains have Ang2-like activity, upregulating pFAK and pERK but not pAKT, while scaffolds presenting 6, 8, 12, 30, or 60 F-domains have Ang1-like activity, upregulating pAKT and inducing migration and vascular stability. The scaffolds with 6 or more F-domains display super-agonist activity, producing stronger phenotypes at lower concentrations than Ang1. Tie2 super-agonist nanoparticles reduced blood extravasation and improved blood-brain barrier integrity four days after a controlled cortical impact injury.

Indexed as

AngiopoietinsEndothelial CellsNeovascularization, PhysiologicReceptor, TIE-2Signal TransductionAngiopoietinsReceptor, TIE-2Aktangiogenesisangiopoietinsself-assembled oligomer proteinTie2

Identifiers

PMID34698433
PMCPMC8647152
OpenAlexW3209265817

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.