Evidence map›Paper›PMID 34698136›Full record

ArticleCurrent issues in molecular biology2021

Oxidized Cell-Free DNA Rapidly Skews the Transcriptional Profile of Brain Cells toward Boosting Neurogenesis and Neuroplasticity.

Anton D Filev, Svetlana V Kostyuk, Pavel E Umriukhin, Vladimir M Pisarev

Open access · goldAbstract read
In one paragraph

Article in Current issues in molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 61% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Anton D FilevResearch Centre for Medical Genetics (RCMG), 115478 Moscow, Russia.
Svetlana V KostyukResearch Centre for Medical Genetics (RCMG), 115478 Moscow, Russia.
Pavel E UmriukhinResearch Centre for Medical Genetics (RCMG), 115478 Moscow, Russia.ORCID 0000-0001-8628-7353
Vladimir M PisarevResearch Centre for Medical Genetics (RCMG), 115478 Moscow, Russia.ORCID 0000-0002-5729-9846
V.A. Negovsky Scientific Research Institute of General Reanimatology · RUSechenov University · RU

Funding

Ministry of Science and Higher Education of the Russian Federation АААА-А19-119032090049-0Russian Foundation for Basic Research 19-34-90072
6 · The paper itself

Abstract

Cell-free DNA (cfDNA) is liberated and accumulated in neural tissue due to cell damage. The oxidative and nitrosative stress in the brain that accompanies various pathological conditions has been shown to increase the oxidation of cellular and cell-free DNA. Whether the high concentration of non-oxidized and oxidized cfDNA may affect the transcriptome response of brain cells has not been studied. In the current work, we studied whether cfDNA fragments affect several key pathways, including neurogenesis, at the level of gene expression in brain cells. In the study, primary rat cerebellum cell cultures were used to assess the effects of oxidized and non-oxidized cfDNA on the expression of 91 genes in brain cells. We found that only oxidized cfDNA, not non-oxidized cfDNA, significantly altered the transcription in brain cells in 3 h. The pattern of change included all 10 upregulated genes (

Indexed as

Oxidation-ReductionTranscriptomeAnimalsBrainCell-Free Nucleic AcidsCells, CulturedCerebellumDisease SusceptibilityDNA DamageGene Expression ProfilingGene Expression RegulationModels, BiologicalNeurogenesisNeuroinflammatory DiseasesNeuronal PlasticityOxidative StressCell-Free Nucleic AcidsinflammationmRNAneurogenesisoxidized cell-free DNA

Identifiers

PMID34698136
PMCPMC8929019
OpenAlexW3206205533

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.