Evidence map›Paper›PMID 34697715›Full record

ArticleMolecular biology reports2022

DNMT1 and DNMT3B gene variants and their association with endometriosis in South Indian women.

K V Veena, Swapna Siddamalla, Mamata Deenadayal, Sisinthy Shivaji, Manjula Bhanoori

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Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

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4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

K V VeenaDepartment of Biochemistry, Osmania University, Hyderabad, 500 007, India.
Swapna SiddamallaDepartment of Biochemistry, Osmania University, Hyderabad, 500 007, India.
Mamata DeenadayalInfertility Institute and Research Centre (IIRC), Secunderabad, India.
Sisinthy ShivajiCentre for Cellular and Molecular Biology (CCMB), Hyderabad, India.
Manjula BhanooriDepartment of Biochemistry, Osmania University, Hyderabad, 500 007, India. bhanoorim@yahoo.co.in.ORCID http://orcid.org/0000-0001-5772-6716
Osmania University · INCentre for Cellular and Molecular Biology · IN

Funding

science and engineering research board DST Sanction No. SR/PURSE Phase 2/32(G)science and engineering research board Lr. No: SR/FT/LS-188/2009
6 · The paper itself

Abstract

backgroundEndometriosis is a multifactorial estrogen dependent gynecological disease characterized by implantation of functional endometrial tissue at ectopic positions. Though this disease is benign, it is associated with an increased risk of malignant transformation. Epigenetic disruptions like aberrant DNA methylation, resulting changes in gene expression capacity, are important in tumor progression and malignant cellular transformation. Therefore, variation in genes involved in DNA methylation might lead to disease susceptibility. PURPOSE: To investigate the association between DNA methyl transferases (DNMT1 and DNMT3B) single nucleotide polymorphisms (SNPs) and the risk of endometriosis in South Indian women.

methodsIn the present study, we examined the genotypic and allele distribution of DNMT1 (rs10423341C/A, rs2228611G/Aandrs4804490C/A) and DNMT3B (rs1569686G/T) among the endometriosis patients (n = 150) and controls (n = 150). The genotypes were analyzed by polymerase chain reaction (PCR) and sequencing methods. Haplotype frequencies for multiple loci and the standardized disequilibrium coefficient (D') for pairwise linkage disequilibrium (LD) were surveyed by Haploview Software.

resultSignificant increase in the frequencies of DNMT1 rs10423341 (P = 0.04601), rs2228611 (P = 0.00175) and DNMT3B rs1569686 (P = 0.033) genotypes and alleles was observed in patients compared to controls. In addition, the frequency of A/A/C (P = 0.0065) haplotype was significantly high in patients. But the DNMT1 (rs4804490) SNP did not show significant association with the disease.

conclusionThe DNMT1 and DNMT3B polymorphism may constitute an inheritable risk factor for endometriosis in South Indian women. To the best of our knowledge there is no reported study on the association of polymorphisms in DNMT1 and DNMT3B with endometriosis risk.

Indexed as

Polymorphism, Single NucleotideAdultCase-Control StudiesDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BEndometriosisFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHumansIndiaLinkage DisequilibriumSequence Analysis, DNAYoung AdultDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BDNMT1 protein, humanEndometriosisEpigenetic genesHaplotype analysisPolymorphismsSouth Indian women

Identifiers

PMID34697715
OpenAlexW3210135322

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.