Evidence map›Paper›PMID 34697646›Full record

ArticleMicrobial ecology2022

The Bradyrhizobium Sp. LmicA16 Type VI Secretion System Is Required for Efficient Nodulation of Lupinus Spp.

L Tighilt, F Boulila, B F S De Sousa, E Giraud, T Ruiz-Argüeso, J M Palacios, J Imperial, L Rey

Abstract read
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In one paragraph

Article in Microbial ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
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  9. CopGBiology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

L TighiltLaboratoire d'Ecologie Microbienne, Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.ORCID http://orcid.org/0000-0002-9220-6959
F BoulilaLaboratoire d'Ecologie Microbienne, Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.ORCID http://orcid.org/0000-0002-1968-7610
B F S De SousaCentro de Biotecnología Y Genómica de Plantas, Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación Y Tecnología Agraria Y Alimentaria (INIA), Campus de Montegancedo, 28223, Madrid, Spain.ORCID http://orcid.org/0000-0003-4125-6611
E GiraudIRD, Laboratoire Des Symbioses Tropicales Et Méditerranéennes (LSTM), UMR IRD/SupAgro/INRA/Université de Montpellier/CIRAD, TA-A82/J-Campus International de Baillarguet, 34398Cedex 5, Montpellier, France.
T Ruiz-ArgüesoCentro de Biotecnología Y Genómica de Plantas, Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación Y Tecnología Agraria Y Alimentaria (INIA), Campus de Montegancedo, 28223, Madrid, Spain.
J M PalaciosCentro de Biotecnología Y Genómica de Plantas, Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación Y Tecnología Agraria Y Alimentaria (INIA), Campus de Montegancedo, 28223, Madrid, Spain.ORCID http://orcid.org/0000-0002-2541-8812
J ImperialCentro de Biotecnología Y Genómica de Plantas, Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación Y Tecnología Agraria Y Alimentaria (INIA), Campus de Montegancedo, 28223, Madrid, Spain.ORCID http://orcid.org/0000-0002-5002-6458
L ReyCentro de Biotecnología Y Genómica de Plantas, Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación Y Tecnología Agraria Y Alimentaria (INIA), Campus de Montegancedo, 28223, Madrid, Spain. luis.rey@upm.es.ORCID http://orcid.org/0000-0003-3477-6942

Funding

anr (fr) ANR-20-CE20-0012anr grants (fr) ANR- 16-CE20-0013cnpq brazil CNPq-GDE-204842/2018-2erasmus + Erasmus+ Programme project 2019-1-ES01-KA107-063778ministerio de ciencia tecnología y telecomunicaciones RTI2018-094985-B-100ministry of higher education and scientific research of algeria National Exceptional Program (PNE)
6 · The paper itself

Abstract

Many bacteria of the genus Bradyrhizobium are capable of inducing nodules in legumes. In this work, the importance of a type VI secretion system (T6SS) in a symbiotic strain of the genus Bradyrhizobium is described. T6SS of Bradyrhizobium sp. LmicA16 (A16) is necessary for efficient nodulation with Lupinus micranthus and Lupinus angustifolius. A mutant in the gene vgrG, coding for a component of the T6SS nanostructure, induced less nodules and smaller plants than the wild-type (wt) strain and was less competitive when co-inoculated with the wt strain. A16 T6SS genes are organized in a 26-kb DNA region in two divergent gene clusters of nine genes each. One of these genes codes for a protein (Tsb1) of unknown function but containing a methyltransferase domain. A tsb1 mutant showed an intermediate symbiotic phenotype regarding vgrG mutant and higher mucoidity than the wt strain in free-living conditions. T6SS promoter fusions to the lacZ reporter indicate expression in nodules but not in free-living cells grown in different media and conditions. The analysis of nodule structure revealed that the level of nodule colonization was significantly reduced in the mutants with respect to the wt strain.

Indexed as

BradyrhizobiumLupinusType VI Secretion SystemsPhylogenyRoot Nodules, PlantSymbiosisType VI Secretion SystemsBradyrhizobiumEffectorLupinusMethyltransferaseRhizobium–legume symbiosisType VI secretion

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.