Evidence map›Paper›PMID 34697321›Full record

ArticleNature communications2021

Functionality of the putative surface glycoproteins of the Wuhan spiny eel influenza virus.

Guha Asthagiri Arunkumar, Disha Bhavsar, Tiehai Li, Shirin Strohmeier, Veronika Chromikova, Fatima Amanat, Mehman Bunyatov, Patrick C Wilson, Ali H Ellebedy, Geert-Jan Boons and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

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  12. Structural and inhibitor sensitivity analysis of influenza B-like viral neuraminidases derived from Asiatic toad and spiny eel.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Guha Asthagiri ArunkumarDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0003-3665-2708
Disha BhavsarDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Tiehai LiComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Shirin StrohmeierDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Veronika ChromikovaDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Fatima AmanatDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0002-8029-8227
Mehman BunyatovDepartment of Chemical Biology and Drug Discovery, Utrecht University, Utrecht, Netherlands.
Patrick C WilsonDepartmentof Medicine, University of Chicago, Chicago, IL, USA.ORCID 0000-0002-3537-1245
Ali H EllebedyDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.ORCID 0000-0002-6129-2532
Geert-Jan BoonsComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Viviana SimonDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0002-6416-5096
Robert P de VriesDepartment of Chemical Biology and Drug Discovery, Utrecht University, Utrecht, Netherlands.
Florian KrammerDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. florian.krammer@mssm.edu.ORCID 0000-0003-4121-776X
Icahn School of Medicine at Mount Sinai · USUniversity of Georgia · USUtrecht University · NLUniversity of Chicago · USWashington University in St. Louis · US

Funding

Toward a Universal Influenza Virus VaccineP01AI097092 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI AHMED, RAFI · 2012 to 2022
$17.6M
Broad humoral protection induced by influenza B neuraminidase-based immunogensR01AI117287 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KRAMMER, FLORIAN · 2016 to 2020
$2.4M
Broad humoral protection induced by influenza B neuraminidase-based immunogensR56AI117287 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KRAMMER, FLORIAN · 2015 to 2015
$424k
NIAID NIH HHS HHSN272201400008CNIAID NIH HHS P01 AI097092NIAID NIH HHS R01 AI117287NIAID NIH HHS R56 AI117287
6 · The paper itself

Abstract

A panel of influenza virus-like sequences were recently documented in fish and amphibians. Of these, the Wuhan spiny eel influenza virus (WSEIV) was found to phylogenetically cluster with influenza B viruses as a sister clade. Influenza B viruses have been documented to circulate only in humans, with certain virus isolates found in harbor seals. It is therefore interesting that a similar virus was potentially found in fish. Here we characterize the putative hemagglutinin (HA) and neuraminidase (NA) surface glycoproteins of the WSEIV. Functionally, we show that the WSEIV NA-like protein has sialidase activity comparable to B/Malaysia/2506/2004 influenza B virus NA, making it a bona fide neuraminidase that is sensitive to NA inhibitors. We tested the functionality of the HA by addressing the receptor specificity, stability, preferential airway protease cleavage, and fusogenicity. We show highly specific binding to monosialic ganglioside 2 (GM2) and fusogenicity at a range of different pH conditions. In addition, we found limited antigenic conservation of the WSEIV HA and NA relative to the B/Malaysia/2506/2004 virus HA and NA. In summary, we perform a functional and antigenic characterization of the glycoproteins of WSEIV to assess if it is indeed a bona fide influenza virus potentially circulating in ray-finned fish.

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalAntibodies, ViralCross ReactionsFishesHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza B virusMiceNeuraminidaseOrthomyxoviridaePhylogenyReceptors, VirusAntibodies, MonoclonalAntibodies, ViralHemagglutinin Glycoproteins, Influenza VirusNeuraminidaseReceptors, Virus

Identifiers

PMID34697321
PMCPMC8546056
OpenAlexW3210525984

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.