Evidence map›Paper›PMID 34696827›Full record

ArticleeLife2021

Infrared molecular fingerprinting of blood-based liquid biopsies for the detection of cancer.

Marinus Huber, Kosmas V Kepesidis, Liudmila Voronina, Frank Fleischmann, Ernst Fill, Jacqueline Hermann, Ina Koch, Katrin Milger-Kneidinger, Thomas Kolben, Gerald B Schulz and 7 more

Abstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  10. The Perils of Molecular Interpretations from Vibrational Spectra of Complex Samples.Angewandte Chemie (International ed. in English) · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Marinus Huber *Ludwig Maximilians University Munich (LMU), Department of Laser Physics, Garching, Germany.ORCID 0000-0001-5309-4475
Kosmas V Kepesidis *Ludwig Maximilians University Munich (LMU), Department of Laser Physics, Garching, Germany.ORCID 0000-0002-6391-7743
Liudmila VoroninaLudwig Maximilians University Munich (LMU), Department of Laser Physics, Garching, Germany.
Frank FleischmannLudwig Maximilians University Munich (LMU), Department of Laser Physics, Garching, Germany.
Ernst FillMax Planck Institute of Quantum Optics (MPQ), Laboratory for Attosecond Physics, Garching, Germany.
Jacqueline HermannLudwig Maximilians University Munich (LMU), Department of Laser Physics, Garching, Germany.
Ina KochAsklepios Biobank for Lung Diseases, Department of Thoracic Surgery, Member of the German Center for Lung Research, DZL, Asklepios Fachkliniken München-Gauting, Munich, Germany.ORCID 0000-0002-8766-017X
Katrin Milger-KneidingerUniversity Hospital of the Ludwig Maximilians University Munich (LMU), Department of Internal Medicine V, Munich, Germany.
Thomas KolbenUniversity Hospital of the Ludwig Maximilians University Munich (LMU), Department of Obstetrics and Gynecology, Breast Center and Comprehensive Cancer Center (CCLMU), Munich, Germany.
Gerald B SchulzUniversity Hospital of the Ludwig Maximilians University Munich (LMU), Department of Urology, Munich, Germany.
Friedrich JokischUniversity Hospital of the Ludwig Maximilians University Munich (LMU), Department of Urology, Munich, Germany.
Jürgen BehrUniversity Hospital of the Ludwig Maximilians University Munich (LMU), Department of Internal Medicine V, Munich, Germany.
Nadia HarbeckUniversity Hospital of the Ludwig Maximilians University Munich (LMU), Department of Obstetrics and Gynecology, Breast Center and Comprehensive Cancer Center (CCLMU), Munich, Germany.
Maximilian ReiserUniversity Hospital of the Ludwig Maximilians University Munich (LMU), Department of Clinical Radiology, Munich, Germany.
Christian StiefUniversity Hospital of the Ludwig Maximilians University Munich (LMU), Department of Urology, Munich, Germany.
Ferenc KrauszLudwig Maximilians University Munich (LMU), Department of Laser Physics, Garching, Germany.
Mihaela ZigmanLudwig Maximilians University Munich (LMU), Department of Laser Physics, Garching, Germany.ORCID 0000-0001-8306-1922

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent omics analyses of human biofluids provide opportunities to probe selected species of biomolecules for disease diagnostics. Fourier-transform infrared (FTIR) spectroscopy investigates the full repertoire of molecular species within a sample at once. Here, we present a multi-institutional study in which we analysed infrared fingerprints of plasma and serum samples from 1639 individuals with different solid tumours and carefully matched symptomatic and non-symptomatic reference individuals. Focusing on breast, bladder, prostate, and lung cancer, we find that infrared molecular fingerprinting is capable of detecting cancer: training a support vector machine algorithm allowed us to obtain binary classification performance in the range of 0.78-0.89 (area under the receiver operating characteristic curve [AUC]), with a clear correlation between AUC and tumour load. Intriguingly, we find that the spectral signatures differ between different cancer types. This study lays the foundation for high-throughput onco-IR-phenotyping of four common cancers, providing a cost-effective, complementary analytical tool for disease recognition.

Indexed as

Breast NeoplasmsFemaleHumansLiquid BiopsyLung NeoplasmsMachine LearningMaleProstatic NeoplasmsSpectroscopy, Fourier Transform InfraredUrinary Bladder Neoplasmscancer detectionhumaninfrared spectroscopyliquid biopsymedicinephenotyping

Identifiers

PMID34696827
PMCPMC8547961

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.