Evidence map›Paper›PMID 34696730›Full record

ArticleBMC plant biology2021

Oxidative and salt stresses alter the 26S proteasome holoenzyme and associated protein profiles in Arabidopsis thaliana.

Diana Bonea, Jenan Noureddine, Sonia Gazzarrini, Rongmin Zhao

Open access · goldAbstract read
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Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Diana BoneaDepartment of Biological Sciences, University of Toronto, 1265 Military Trail, Toronto, ON, M1C 1A4, Canada.
Jenan NoureddineDepartment of Biological Sciences, University of Toronto, 1265 Military Trail, Toronto, ON, M1C 1A4, Canada.
Sonia GazzarriniDepartment of Biological Sciences, University of Toronto, 1265 Military Trail, Toronto, ON, M1C 1A4, Canada. sonia.gazzarrini@utoronto.ca.ORCID https://orcid.org/0000-0003-4445-5659
Rongmin ZhaoDepartment of Biological Sciences, University of Toronto, 1265 Military Trail, Toronto, ON, M1C 1A4, Canada. rongmin.zhao@utoronto.ca.ORCID https://orcid.org/0000-0003-1300-5882
University of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe 26S proteasome, canonically composed of multi-subunit 19S regulatory (RP) and 20S core (CP) particles, is crucial for cellular proteostasis. Proteasomes are re-modeled, activated, or re-localized and this regulation is critical for plants in response to environmental stresses. The proteasome holoenzyme assembly and dissociation are therefore highly dynamic in vivo. However, the stoichiometric changes of the plant proteasomes and how proteasome associated chaperones vary under common abiotic stresses have not been systematically studied.

resultsHere, we studied the impact of abiotic stresses on proteasome structure, activity, and interacting partners in Arabidopsis thaliana. We analyzed available RNA expression data and observed that expressions of proteasome coding genes varied substantially under stresses; however, the protein levels of a few key subunits did not change significantly within 24 h. Instead, a switch in the predominant proteasome complex, from 26S to 20S, occurs under oxidative or salt stress. Oxidative stress also reduced the cellular ATP content and the association of HSP70-family proteins to the 20S proteasome, but enhanced the activity of cellular free form CP. Salt stress, on the other hand, did not affect cellular ATP level, but caused subtle changes in proteasome subunit composition and impacted bindings of assembly chaperones. Analyses of an array of T-DNA insertional mutant lines highlighted important roles for several putative assembly chaperones in seedling establishment and stress sensitivity. We also observed that knockout of PBAC1, one of the α-ring assembly chaperones, resulted in reduced germination and tearing of the seed coat following sterilization.

conclusionsOur study revealed an evolutionarily conserved mechanism of proteasome regulation during oxidative stress, involving dynamic regulation of the holoenzyme formation and associated regulatory proteins, and we also identified a novel role of the PBAC1 proteasome assembly chaperone in seed coat development.

Indexed as

Oxidative StressSalt StressAdaptation, PhysiologicalArabidopsisArabidopsis ProteinsHoloenzymesMolecular ChaperonesProteasome Endopeptidase ComplexTranscription FactorsArabidopsis ProteinsHoloenzymesMolecular ChaperonesProteasome Endopeptidase ComplexTranscription Factors26S proteasomeAbiotic stressesAssembly chaperoneMolecular chaperonePBAC1Plant stress responseProteasome assemblyProtein degradationProtein homeostasis

Identifiers

PMID34696730
PMCPMC8543921
OpenAlexW3172678489

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.