Evidence map›Paper›PMID 34696445›Full record

ArticleViruses2021

An Opportunistic Survey Reveals an Unexpected Coronavirus Diversity Hotspot in North America.

Hon S Ip, Kathryn M Griffin, Jeffrey D Messer, Megan E Winzeler, Susan A Shriner, Mary Lea Killian, Mia K Torchetti, Thomas J DeLiberto, Brian R Amman, Caitlin M Cossaboom and 7 more

Abstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. COVID-19-related hospital admission in spouses of partners in at-risk occupations.Scandinavian journal of work, environment & health · 2023
    Article
  7. Article
  8. Article
  9. Second round of an interlaboratory comparison of SARS-CoV2 molecular detection assays used by 45 veterinary diagnostic laboratories in the United States.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Hon S IpUnited States Geological Survey, National Wildlife Health Center, Laboratory Services Branch, Madison, WI 53711, USA.ORCID 0000-0003-4844-7533
Kathryn M GriffinUnited States Geological Survey, National Wildlife Health Center, Laboratory Services Branch, Madison, WI 53711, USA.ORCID 0000-0003-1809-0019
Jeffrey D MesserUnited States Geological Survey, National Wildlife Health Center, Laboratory Services Branch, Madison, WI 53711, USA.
Megan E WinzelerUnited States Geological Survey, National Wildlife Health Center, Laboratory Services Branch, Madison, WI 53711, USA.
Susan A ShrinerWildlife Services, National Wildlife Research Center, United States Department of Agriculture, Fort Collins, CO 80521, USA.ORCID 0000-0003-0349-7182
Mary Lea KillianNational Veterinary Services Laboratories, Diagnostic Virology Laboratory, United States Department of Agriculture, Ames, IA 50010, USA.
Mia K TorchettiNational Veterinary Services Laboratories, Diagnostic Virology Laboratory, United States Department of Agriculture, Ames, IA 50010, USA.
Thomas J DeLibertoWildlife Services, National Wildlife Research Center, United States Department of Agriculture, Fort Collins, CO 80521, USA.
Brian R AmmanCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Atlanta, GA 30329, USA.ORCID 0000-0002-4726-2361
Caitlin M CossaboomCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Atlanta, GA 30329, USA.ORCID 0000-0001-5020-5408
R Reid HarveyCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Atlanta, GA 30329, USA.
Natalie M WendlingCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Atlanta, GA 30329, USA.
Hannah RettlerUtah Department of Health, Salt Lake City, UT 84114, USA.
Dean TaylorUtah Department of Agriculture and Food, Salt Lake City, UT 84116, USA.
Jonathan S TownerCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Atlanta, GA 30329, USA.ORCID 0000-0002-6473-3049
Casey Barton BehraveshCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Atlanta, GA 30329, USA.
David S BlehertUnited States Geological Survey, National Wildlife Health Center, Laboratory Services Branch, Madison, WI 53711, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In summer 2020, Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) was detected on mink farms in Utah. An interagency One Health response was initiated to assess the extent of the outbreak and included sampling animals from on or near affected mink farms and testing them for SARS-CoV-2 and non-SARS coronaviruses. Among the 365 animals sampled, including domestic cats, mink, rodents, raccoons, and skunks, 261 (72%) of the animals harbored at least one coronavirus. Among the samples that could be further characterized, 127 alphacoronaviruses and 88 betacoronaviruses (including 74 detections of SARS-CoV-2 in mink) were identified. Moreover, at least 10% (

Indexed as

AlphacoronavirusAnimalsAnimals, DomesticAnimals, WildCatsCOVID-19Disease HotspotFemaleMaleMephitidaeMiceMinkRaccoonsSARS-CoV-2Utahcoronavirusminkmink farmpandemicSARS-CoV-2spill-overzoonosis

Identifiers

PMID34696445
PMCPMC8539472

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.