Evidence map›Paper›PMID 34695120›Full record

ArticlePLoS computational biology2021

Complexity and diversity in sparse code priors improve receptive field characterization of Macaque V1 neurons.

Ziniu Wu, Harold Rockwell, Yimeng Zhang, Shiming Tang, Tai Sing Lee

Abstract read
In one paragraph

Article in PLoS computational biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

Ziniu WuCenter for the Neural Basis of Cognition and Neuroscience Institute, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.
Harold RockwellCenter for the Neural Basis of Cognition and Neuroscience Institute, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.
Yimeng ZhangCenter for the Neural Basis of Cognition and Neuroscience Institute, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.ORCID 0000-0003-2248-8951
Shiming TangCenter for Life Sciences, Peking University, Beijing, China.ORCID 0000-0003-0294-3259
Tai Sing LeeCenter for the Neural Basis of Cognition and Neuroscience Institute, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.ORCID 0000-0003-4483-5694

Funding

Interdiscplinary Training in Computational NeuroscienceR90DA023426 · NIDA · CARNEGIE-MELLON UNIVERSITY · PI KASS, ROBERT E, RUBIN, JONATHAN E. · 2006 to 2020
$4.5M
REPRESENTATION OF FAMILIAR IMAGES IN VENTRAL STREAM VISUAL CORTEXR01EY030226 · NEI · CARNEGIE-MELLON UNIVERSITY · PI LEE, TAI-SING, OLSON, CARL ROGER · 2020 to 2022
$1.3M
NEI NIH HHS R01 EY030226NIDA NIH HHS R90 DA023426
6 · The paper itself

Abstract

System identification techniques-projection pursuit regression models (PPRs) and convolutional neural networks (CNNs)-provide state-of-the-art performance in predicting visual cortical neurons' responses to arbitrary input stimuli. However, the constituent kernels recovered by these methods are often noisy and lack coherent structure, making it difficult to understand the underlying component features of a neuron's receptive field. In this paper, we show that using a dictionary of diverse kernels with complex shapes learned from natural scenes based on efficient coding theory, as the front-end for PPRs and CNNs can improve their performance in neuronal response prediction as well as algorithmic data efficiency and convergence speed. Extensive experimental results also indicate that these sparse-code kernels provide important information on the component features of a neuron's receptive field. In addition, we find that models with the complex-shaped sparse code front-end are significantly better than models with a standard orientation-selective Gabor filter front-end for modeling V1 neurons that have been found to exhibit complex pattern selectivity. We show that the relative performance difference due to these two front-ends can be used to produce a sensitive metric for detecting complex selectivity in V1 neurons.

Indexed as

Models, NeurologicalAlgorithmsAnimalsComputational BiologyMacacaNeural Networks, ComputerNeuronsVisual Cortex

Identifiers

PMID34695120
PMCPMC8589190

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.