Evidence map›Paper›PMID 34694685›Full record

ArticleThe FEBS journal2022

Cytosolic localization and in vitro assembly of human de novo thymidylate synthesis complex.

Sharon Spizzichino, Dalila Boi, Giovanna Boumis, Roberta Lucchi, Francesca Romana Liberati, Davide Capelli, Roberta Montanari, Giorgio Pochetti, Roberta Piacentini, Giacomo Parisi and 7 more

Open access · greenAbstract read
In one paragraph

Article in The FEBS journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 citations in OpenAlex.

  1. Metabolomics and bioinformatics study of baicalin in treating pulmonary fibrosis.Naunyn-Schmiedeberg's archives of pharmacology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Sharon SpizzichinoDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.
Dalila BoiDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.
Giovanna BoumisDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.ORCID 0000-0001-5323-7288
Roberta LucchiDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.
Francesca Romana LiberatiDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.
Davide CapelliIstituto di Cristallografia, Consiglio Nazionale delle Ricerche, Rome, Italy.
Roberta MontanariIstituto di Cristallografia, Consiglio Nazionale delle Ricerche, Rome, Italy.
Giorgio PochettiIstituto di Cristallografia, Consiglio Nazionale delle Ricerche, Rome, Italy.
Roberta PiacentiniCenter for Life Nano & Neuro-Science, Fondazione Istituto Italiano di Tecnologia (IIT), Rome, Italy.
Giacomo ParisiCenter for Life Nano & Neuro-Science, Fondazione Istituto Italiano di Tecnologia (IIT), Rome, Italy.
Alessio PaoneDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.ORCID 0000-0001-9406-3982
Serena RinaldoDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.ORCID 0000-0003-0682-023X
Roberto ContestabileDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.ORCID 0000-0002-5235-9993
Angela TramontiDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.ORCID 0000-0002-5625-1170
Alessandro PaiardiniDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.ORCID 0000-0001-9078-7545
Giorgio GiardinaDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.ORCID 0000-0002-0802-1370
Francesca CutruzzolàDepartment of Biochemical Sciences, Sapienza University of Rome, Rome, Italy.ORCID 0000-0002-4621-2135
Sapienza University of Rome · ITInstitute of Crystallography · ITInstitute of Molecular Biology and Pathology · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

De novo thymidylate synthesis is a crucial pathway for normal and cancer cells. Deoxythymidine monophosphate (dTMP) is synthesized by the combined action of three enzymes: serine hydroxymethyltransferase (SHMT1), dihydrofolate reductase (DHFR) and thymidylate synthase (TYMS), with the latter two being targets of widely used chemotherapeutics such as antifolates and 5-fluorouracil. These proteins translocate to the nucleus after SUMOylation and are suggested to assemble in this compartment into the thymidylate synthesis complex. We report the intracellular dynamics of the complex in cancer cells by an in situ proximity ligation assay, showing that it is also detected in the cytoplasm. This result indicates that the role of the thymidylate synthesis complex assembly may go beyond dTMP synthesis. We have successfully assembled the dTMP synthesis complex in vitro, employing tetrameric SHMT1 and a bifunctional chimeric enzyme comprising human thymidylate synthase and dihydrofolate reductase. We show that the SHMT1 tetrameric state is required for efficient complex assembly, indicating that this aggregation state is evolutionarily selected in eukaryotes to optimize protein-protein interactions. Lastly, our results regarding the activity of the complete thymidylate cycle in vitro may provide a useful tool with respect to developing drugs targeting the entire complex instead of the individual components.

Indexed as

Thymidine MonophosphateThymidylate SynthaseCell NucleusGlycine HydroxymethyltransferaseHumansTetrahydrofolate DehydrogenaseGlycine HydroxymethyltransferaseTetrahydrofolate DehydrogenaseThymidine MonophosphateThymidylate Synthasecancer metabolismprotein-protein complexpurine synthesisthymidylate synthesistransient interactions

Identifiers

PMID34694685
PMCPMC9299187
OpenAlexW3210730341

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.