Evidence map›Paper›PMID 34692211›Full record

ArticleBiomedical optics express2021

Machine learning model with physical constraints for diffuse optical tomography.

Yun Zou, Yifeng Zeng, Shuying Li, Quing Zhu

Abstract read
In one paragraph

Article in Biomedical optics express, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yun ZouDepartment of Biomedical Engineering, Washington University, St. Louis, Missouri 63130, USA.
Yifeng ZengDepartment of Biomedical Engineering, Washington University, St. Louis, Missouri 63130, USA.
Shuying LiDepartment of Biomedical Engineering, Washington University, St. Louis, Missouri 63130, USA.
Quing ZhuDepartment of Biomedical Engineering, Washington University, St. Louis, Missouri 63130, USA.ORCID https://orcid.org/0000-0002-1837-2588

Funding

Near Infrared Diffused Light Imaging with Ultrasound Guidance: Predicting Neoadjuvant Chemotherapy ResponseR01EB002136 · NIBIB · WASHINGTON UNIVERSITY · PI ZHU, QUING · 2003 to 2016
$3.4M
Improving diagnostic US for reduction of benign breast biopsies using US-guided Optical TomographyR01CA228047 · NCI · WASHINGTON UNIVERSITY · PI POPLACK, STEVEN, ZHU, QUING · 2019 to 2023
$1.9M
NCI NIH HHS R01 CA228047NIBIB NIH HHS R01 EB002136
6 · The paper itself

Abstract

A machine learning model with physical constraints (ML-PC) is introduced to perform diffuse optical tomography (DOT) reconstruction. DOT reconstruction is an ill-posed and under-determined problem, and its quality suffers by model mismatches, complex boundary conditions, tissue-probe contact, noise etc. Here, for the first time, we combine ultrasound-guided DOT with ML to facilitate DOT reconstruction. Our method has two key components: (i) a neural network based on auto-encoder is adopted for DOT reconstruction, and (ii) physical constraints are implemented to achieve accurate reconstruction. Both qualitative and quantitative results demonstrate that the accuracy of the proposed method surpasses that of existing models. In a phantom study, compared with the Born conjugate gradient descent (Born-CGD) reconstruction method, the ML-PC method decreases the mean percentage error of the reconstructed maximum absorption coefficient from 16.41% to 13.4% for high contrast phantoms and from 23.42% to 9.06% for low contrast phantoms, with improved depth distribution of the target absorption maps. In a clinical study, better contrast was obtained between malignant and benign breast lesions, with the ratio of the medians of the maximum absorption coefficient improved from 1.63 to 2.22.

Identifiers

PMID34692211
PMCPMC8515969

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.