Evidence map›Paper›PMID 34687295›Full record

ArticleJournal of molecular cell biology2021

Transcriptomic characteristics and impaired immune function of patients who retest positive for SARS-CoV-2 RNA.

Dongyao Wang, Dong Wang, Min Huang, Xiaohu Zheng, Yiqing Shen, Binqing Fu, Hong Zhao, Xianxiang Chen, Peng Peng, Qi Zhu and 6 more

Open access · goldAbstract read
In one paragraph

Article in Journal of molecular cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  6. Advances in Immunotherapy for Hepatitis B.Pathogens (Basel, Switzerland) · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 1 country.

Dongyao WangDivision of Life Sciences and Medicine, Department of Hematology, The First Affiliated Hospital of University of Science and Technology of China, University of Science and Technology of China, Hefei 230001, China.
Dong WangInstitute of Immunology and the CAS Key Laboratory of Innate Immunity and Chronic Disease, School of Basic Medicine and Medical Center, University of Science and Technology of China, Hefei 230001, China.
Min HuangDepartment of Laboratory Medicine, Tongji Hospital, Tongji Medical College, HuaZhong University of Science and Technology, Wuhan 430030, China.
Xiaohu ZhengInstitute of Immunology and the CAS Key Laboratory of Innate Immunity and Chronic Disease, School of Basic Medicine and Medical Center, University of Science and Technology of China, Hefei 230001, China.
Yiqing ShenInstitute of Immunology and the CAS Key Laboratory of Innate Immunity and Chronic Disease, School of Basic Medicine and Medical Center, University of Science and Technology of China, Hefei 230001, China.
Binqing FuDivision of Life Sciences and Medicine, Department of Hematology, The First Affiliated Hospital of University of Science and Technology of China, University of Science and Technology of China, Hefei 230001, China.
Hong ZhaoDepartment of Infectious Diseases, Peking University First Hospital, Beijing 100034, China.
Xianxiang ChenDepartment of Tuberculosis, Wuhan Pulmonary Hospital, Wuhan 430030, China.
Peng PengDepartment of Tuberculosis, Wuhan Pulmonary Hospital, Wuhan 430030, China.
Qi ZhuDepartment of Tuberculosis, Wuhan Pulmonary Hospital, Wuhan 430030, China.
Yonggang ZhouDivision of Life Sciences and Medicine, Department of Hematology, The First Affiliated Hospital of University of Science and Technology of China, University of Science and Technology of China, Hefei 230001, China.
Jinghe ZhangInstitute of Immunology and the CAS Key Laboratory of Innate Immunity and Chronic Disease, School of Basic Medicine and Medical Center, University of Science and Technology of China, Hefei 230001, China.
Zhigang TianDivision of Life Sciences and Medicine, Department of Hematology, The First Affiliated Hospital of University of Science and Technology of China, University of Science and Technology of China, Hefei 230001, China.
Wuxiang GuanCenter for Emerging Infectious Diseases, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China.
Guiqiang WangDepartment of Infectious Diseases, Peking University First Hospital, Beijing 100034, China.
Haiming WeiDivision of Life Sciences and Medicine, Department of Hematology, The First Affiliated Hospital of University of Science and Technology of China, University of Science and Technology of China, Hefei 230001, China.
Hefei National Center for Physical Sciences at Nanoscale · CNUniversity of Science and Technology of China · CNWuhan Pulmonary Hospital · CNChinese Academy of Sciences · CNPeking University First Hospital · CNPeking University International Hospital · CNTongji Hospital · CN

Funding

China National Center for Biotechnology Development 2020YFC0843800China Postdoctoral Science Foundation 2020T130112ZXMinistry of Science and Technology of China 2020TFC0844100Postdoctoral Foundation of Hefei 2020130
6 · The paper itself

Abstract

Coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection, has become a global public health crisis. Some patients who have recovered from COVID-19 subsequently test positive again for SARS-CoV-2 RNA after discharge from hospital. How such retest-positive (RTP) patients become infected again is not known. In this study, 30 RTP patients, 20 convalescent patients, and 20 healthy controls were enrolled for the analysis of immunological characteristics of their peripheral blood mononuclear cells. We found that absolute numbers of CD4+ T cells, CD8+ T cells, and natural killer cells were not substantially decreased in RTP patients, but the expression of activation markers on these cells was significantly reduced. The percentage of granzyme B-producing T cells was also lower in RTP patients than in convalescent patients. Through transcriptome sequencing, we demonstrated that high expression of inhibitor of differentiation 1 (ID1) and low expression of interferon-induced transmembrane protein 10 (IFITM10) were associated with insufficient activation of immune cells and the occurrence of RTP. These findings provide insight into the impaired immune function associated with COVID-19 and the pathogenesis of RTP, which may contribute to a better understanding of the mechanisms underlying RTP.

Indexed as

ConvalescenceAdultAgedAged, 80 and overAntigens, CDCase-Control StudiesCOVID-19COVID-19 Nucleic Acid TestingFemaleHealthy VolunteersHost-Pathogen InteractionsHumansInhibitor of Differentiation Protein 1Lymphocyte Activation Gene 3 ProteinMaleMiddle AgedAntigens, CDID1 protein, humanInhibitor of Differentiation Protein 1Lymphocyte Activation Gene 3 ProteinRNA, ViralCD8+COVID-19immune functionNK cellsRTP patientsT cells

Identifiers

PMID34687295
PMCPMC8574305
OpenAlexW3207723583

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.