Evidence map›Paper›PMID 34686548›Full record

ArticleBMJ open2021

Gut microbiome, enteric infections and child growth across a rural-urban gradient: protocol for the ECoMiD prospective cohort study.

Gwenyth O Lee, Joseph N S Eisenberg, Jessica Uruchima, Gabriela Vasco, Shanon M Smith, Amanda Van Engen, Courtney Victor, Elise Reynolds, Rebecca MacKay, Kelsey J Jesser and 6 more

Open access · goldAbstract read
In one paragraph

Article in BMJ open, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Environmental Exposures and the Human Gut Resistome in Northwest Ecuador.medRxiv : the preprint server for health sciences · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Gwenyth O LeeDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA golee@umich.edu.ORCID 0000-0002-7889-3852
Joseph N S EisenbergDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Jessica UruchimaDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Gabriela VascoInstituto de Microbiología, Universidad San Francisco de Quito, Quito, Pichincha, Ecuador.ORCID 0000-0002-8318-2465
Shanon M SmithDepartment of Environmental Health, Emory University Rollins School of Public Health, Atlanta, Georgia, USA.
Amanda Van EngenDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Courtney VictorDepartment of Environmental Health, Emory University Rollins School of Public Health, Atlanta, Georgia, USA.
Elise ReynoldsDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Rebecca MacKayDepartment of Environmental Health, Emory University Rollins School of Public Health, Atlanta, Georgia, USA.
Kelsey J JesserDepartment of Environmental and Occupational Health Sciences, University of Washington School of Public Health, Seattle, Washington, USA.
Nancy CastroCarrera de Nutrición y Dietética, Universidad San Francisco de Quito, Quito, Pichincha, Ecuador.
Manuel CalvopiñaCarrera de Medicina, Universidad de Las Americas Facultad de Ciencias de la Salud, Quito, Pichincha, Ecuador.
Konstantinos T KonstantinidisSchool of Civil and Environmental Engineering, Georgia Institute of Technology, Atlanta, Georgia, USA.
William CevallosInstituto de Biomedicina, Facultad de Ciencias Médicas, Universidad Central del Ecuador, Quito, Ecuador.
Gabriel TruebaInstituto de Microbiología, Universidad San Francisco de Quito, Quito, Pichincha, Ecuador.
Karen LevyDepartment of Environmental and Occupational Health Sciences, University of Washington School of Public Health, Seattle, Washington, USA.ORCID 0000-0002-0968-9401
University of Michigan · USEmory University · USCentral University of Ecuador · ECUniversidad San Francisco de Quito · ECUniversity of Washington · USGeorgia Institute of Technology · USUniversidad de Las Américas · EC

Funding

Environmetal Pathology/Toxicology Training ProgramT32ES007032 · NIEHS · UNIVERSITY OF WASHINGTON · PI FAUSTMAN, ELAINE M, ROSENFELD, MICHAEL E · 1985 to 2023
$10.7M
Graduate and Postdoctoral Training in ToxicologyT32ES012870 · NIEHS · EMORY UNIVERSITY · PI Carmen Joseph Marsit · 2004 to 2026
$9.1M
Gut microbiome, enteric infections and child growth across a rurual urban gradientR01AI137679 · NIAID · UNIVERSITY OF WASHINGTON · PI EISENBERG, JOSEPH N. S., LEVY, KAREN · 2018 to 2023
$5.3M
NIAID NIH HHS R01 AI137679NIEHS NIH HHS T32 ES007032NIEHS NIH HHS T32 ES012870
6 · The paper itself

Abstract

introductionThe functional consequences of the bacterial gut microbiome for child health are not well understood. Characteristics of the early child gut microbiome may influence the course of enteric infections, and enteric infections may change the composition of the gut microbiome, all of which may have long-term implications for child growth and development. METHODS AND ANALYSIS: We are conducting a community-based birth cohort study to examine interactions between gut microbiome conditions and enteric infections, and how environmental conditions affect the development of the gut microbiome. We will follow 360 newborns from 3 sites along a rural-urban gradient in northern coastal Ecuador, characterising enteric infections and gut microbial communities in the children every 3 to 6 months over their first 2 years of life. We will use longitudinal regression models to assess the correlation between environmental conditions and gut microbiome diversity and presence of specific taxa, controlling for factors that are known to be associated with the gut microbiome, such as diet. From 6 to 12 months of age, we will collect weekly stool samples to compare microbiome conditions in diarrhoea stools versus stools from healthy children prior to, during and after acute enteric infections, using principal-coordinate analysis and other multivariate statistical methods. ETHICS AND DISSEMINATION: Ethics approvals have been obtained from Emory University and the Universidad San Francisco de Quito institutional review boards. The findings will be disseminated through conference presentations and peer-reviewed journals.

Indexed as

Gastrointestinal MicrobiomeMicrobiotaCohort StudiesFecesHumansProspective Studiescommunity child healthepidemiologymolecular biologypublic healthtropical medicine

Identifiers

PMID34686548
PMCPMC8543627
OpenAlexW3205512022

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.