Evidence map›Paper›PMID 34685941›Full record

ArticlePlants (Basel, Switzerland)2021

Sensitive and Rapid Detection of Citrus Scab Using an RPA-CRISPR/Cas12a System Combined with a Lateral Flow Assay.

Kihye Shin, Soon-Hwa Kwon, Seong-Chan Lee, Young-Eel Moon

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Identification of Viruses InfectingInternational journal of molecular sciences · 2024
    Article
  10. Article
  11. CRISPR-based nucleic acid diagnostics for pathogens.Trends in analytical chemistry : TRAC · 2023
    Review
  12. Review
  13. RPA-CRISPR/Cas12a mediated isothermal amplification for visual detection ofFrontiers in cellular and infection microbiology · 2023
    Article
  14. CRISPR/Cas12a-based approaches for efficient and accurate detection ofFrontiers in cellular and infection microbiology · 2023
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kihye ShinCitrus Research Institute, National Institute of Horticultural and Herbal Science, Rural Development Administration, Jeju 63607, Korea.
Soon-Hwa KwonCitrus Research Institute, National Institute of Horticultural and Herbal Science, Rural Development Administration, Jeju 63607, Korea.
Seong-Chan LeeCitrus Research Institute, National Institute of Horticultural and Herbal Science, Rural Development Administration, Jeju 63607, Korea.
Young-Eel MoonCitrus Research Institute, National Institute of Horticultural and Herbal Science, Rural Development Administration, Jeju 63607, Korea.
Rural Development Administration · KR

Funding

Rural Development Administration PJ01440101
6 · The paper itself

Abstract

Citrus is the most extensively produced fruit tree crop in the world and is grown in over 130 countries. Fungal diseases in citrus can cause significant losses in yield and quality. An accurate diagnosis is critical for determining the best management practices and preventing future losses. In this study, a Recombinase polymerase amplification (RPA)-clustered regularly interspaced short palindromic repeats (CRISPR)/associated (Cas) system was established with the integration of a lateral flow assay (LFA) readout system for diagnosis of citrus scab. This detection can be completed within 1 h, is highly sensitive and prevents cross-reactions with other common fungal citrus diseases. Furthermore, the detection system is compatible with crude DNA extracted from infected plant tissue. This RPA-CRISPR/Cas12a-LFA system provides a sensitive, rapid, and cost-effective method with promising and significant practical value for point-of-care diagnosis of citrus scab. To our knowledge, this is the first report to establish an RPA- and CRISPR-based method with LFA for fungal diseases in plants.

Indexed as

citrus scabCRISPR/Cas12aElsinoë fawcettiilateral flow assayrecombinase polymerase amplification

Identifiers

PMID34685941
PMCPMC8539466
OpenAlexW3204307811

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.