Evidence map›Paper›PMID 34684233›Full record

ArticlePathogens (Basel, Switzerland)2021

Emerging Mutations in Nsp1 of SARS-CoV-2 and Their Effect on the Structural Stability.

Kejie Mou, Farwa Mukhtar, Muhammad Tahir Khan, Doaa B Darwish, Shaoliang Peng, Shabbir Muhammad, Abdullah G Al-Sehemi, Dong-Qing Wei

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Kejie MouDepartment of Neurosurgery, Bishan Hospital of Chongqing, Chongqing 402760, China.
Farwa MukhtarInstitute of Molecular Biology and Biotechnology (IMBB), The University of Lahore, KM Defence Road, Lahore 58810, Pakistan.
Muhammad Tahir KhanInstitute of Molecular Biology and Biotechnology (IMBB), The University of Lahore, KM Defence Road, Lahore 58810, Pakistan.
Doaa B DarwishBotany Department, Faculty of Science, Mansoura University, Mansoura 35516, Egypt.ORCID 0000-0002-2646-3340
Shaoliang PengPeng Cheng Laboratory, Vanke Cloud City Phase I Building 8, Xili Street, Nashan District, Shenzhen 518055, China.
Shabbir MuhammadDepartment of Physics, College of Science, King Khalid University, Abha 61413, Saudi Arabia.ORCID 0000-0003-4908-3313
Abdullah G Al-SehemiResearch Center for Advanced Materials Science (RCAMS), King Khalid University, Abha 61413, Saudi Arabia.
Dong-Qing WeiPeng Cheng Laboratory, Vanke Cloud City Phase I Building 8, Xili Street, Nashan District, Shenzhen 518055, China.ORCID 0000-0003-4200-7502
King Khalid University · SAUniversity of Lahore · PKMansoura University · EGPeople's Hospital of Bishan District · CNShanghai Jiao Tong University · CNVanke (China) · CN

Funding

Chongqing Education Science Research Program for the 13th Five-year Plan 2018-GX-462Key project of education and teaching reform in Chongqing Medical and Pharmaceutical College CQYGZJG1909King Khalid University extends their appreciation to the Deanship of Scientific Research at King Khalid University for funding the work through the research project RGP.2-128-42National Natural Science Foundation of China 32070662, 61832019, 32030063Science and Technology Commission of Shanghai Municipality 19430750600science and technology research of Chongqing Municipal Education Commission kjzd-k201902802Talent introduction project of Chongqing Medical and Pharmaceutical College ygz2016302
6 · The paper itself

Abstract

The genome of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) encodes 16 non-structural (Nsp) and 4 structural proteins. Among the Nsps, Nsp1 inhibits host gene expression and also evades the immune system. This protein has been proposed as a target for vaccine development and also for drug design. Owing to its important role, the current study aimed to identify mutations in Nsp1 and their effect on protein stability and flexibility. This is the first comprehensive study in which 295,000 complete genomes have been screened for mutations after alignment with the Wuhan-Hu-1 reference genome (Accession NC_045512), using the CoVsurver app. The sequences harbored 933 mutations in the entire coding region of Nsp1. The most frequently occurring mutation in the 180-amino-acid Nsp1 protein was R24C (

Indexed as

genomemutationsNsp1SARS-CoV-2

Identifiers

PMID34684233
PMCPMC8539063
OpenAlexW3202880756

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.