Evidence map›Paper›PMID 34683445›Full record

ArticleMicroorganisms2021

Transcriptome Analysis of Environmental

Parisa Chegounian, Stephane Flibotte, Kerry Peru, John Headley, Dena McMartin, Bryne Gramlich, Vikramaditya G Yadav

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microorganisms, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Parisa ChegounianDepartment of Chemical and Biological Engineering, The University of British Columbia, Vancouver, BC V6T 1Z3, Canada.
Stephane FlibotteUBC/LSI Bioinformatics Facility, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.
Kerry PeruWatershed Hydrology and Ecology Research Division, Water and Science Technology Directorate, Environment & Climate Change Canada, Saskatoon, SK S7N 3H5, Canada.ORCID 0000-0002-2819-8595
John HeadleyWatershed Hydrology and Ecology Research Division, Water and Science Technology Directorate, Environment & Climate Change Canada, Saskatoon, SK S7N 3H5, Canada.
Dena McMartinDepartment of Civil, Geological and Environmental Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada.
Bryne GramlichAllonnia L.L.C., Boston, MA 02210, USA.
Vikramaditya G YadavDepartment of Chemical and Biological Engineering, The University of British Columbia, Vancouver, BC V6T 1Z3, Canada.ORCID 0000-0002-1120-6392
University of British Columbia · CAEnvironment and Climate Change Canada · CAUniversity of Saskatchewan · CA

Funding

Genome British Columbia UPP034Natural Sciences and Engineering Research Council Discovery Grant
6 · The paper itself

Abstract

Naphthenic acid fraction compounds (NAFCs) are highly recalcitrant constituents of oil sands tailings. Although some microorganisms in the tailings can individually and synergistically metabolize NAFCs, the biochemical mechanisms that underpin these processes are hitherto unknown. To this end, we isolated two microorganisms,

Indexed as

biodegradationbioinformaticsmicrobial consortianaphthenic acidspseudomonadstranscriptomics

Identifiers

PMID34683445
PMCPMC8540809
OpenAlexW3207065929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.