Evidence map›Paper›PMID 34682274›Full record

ArticleJournal of fungi (Basel, Switzerland)2021

Evidence for Lignocellulose-Decomposing Enzymes in the Genome and Transcriptome of the Aquatic Hyphomycete

Felix Heeger, Elizabeth C Bourne, Christian Wurzbacher, Elisabeth Funke, Anna Lipzen, Guifen He, Vivian Ng, Igor V Grigoriev, Dietmar Schlosser, Michael T Monaghan

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Characteristics ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  2. Article
  3. A High-Quality Genome Sequence of theInternational journal of molecular sciences · 2023
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Felix HeegerDepartment Ecosystem Research, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), 12587 Berlin, Germany.ORCID 0000-0003-3519-2973
Elizabeth C BourneDepartment Ecosystem Research, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), 12587 Berlin, Germany.
Christian WurzbacherChair of Urban Water Systems Engineering, Technical University of Munich, 85748 Garching, Germany.
Elisabeth FunkeDepartment Ecosystem Research, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), 12587 Berlin, Germany.
Anna LipzenUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Guifen HeUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Vivian NgUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Igor V GrigorievUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Dietmar SchlosserDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, 04318 Leipzig, Germany.ORCID 0000-0003-1353-8136
Michael T MonaghanDepartment Ecosystem Research, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), 12587 Berlin, Germany.ORCID 0000-0001-6200-2376
Lawrence Berkeley National Laboratory · USLeibniz Institute of Freshwater Ecology and Inland Fisheries · DEFederal Institute For Materials Research and Testing · DEHelmholtz Centre for Environmental Research · DETechnical University of Munich · DE

Funding

Helmholtz-Gemeinschaft Tapping nature's potential for sustainable production and a healthy environmentJoint Genome Institute CSP 1663Leibniz-Gemeinschaft SAW-2014-IGB-1Office of Science DE-AC02-05CH11231
6 · The paper itself

Abstract

Fungi are ecologically outstanding decomposers of lignocellulose. Fungal lignocellulose degradation is prominent in saprotrophic Ascomycota and Basidiomycota of the subkingdom Dikarya. Despite ascomycetes dominating the Dikarya inventory of aquatic environments, genome and transcriptome data relating to enzymes involved in lignocellulose decay remain limited to terrestrial representatives of these phyla. We sequenced the genome of an exclusively aquatic ascomycete (the aquatic hyphomycete

Indexed as

aquatic fungidifferential expressionlaccaselignocelluloseRNA-Seq

Identifiers

PMID34682274
PMCPMC8537685
OpenAlexW3205245075

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.