Evidence map›Paper›PMID 34681013›Full record

ArticleGenes2021

More Than a Moggy; A Population Genetics Analysis of the United Kingdom's Non-Pedigree Cats.

Jennifer Irving McGrath, Wengang Zhang, Regina Hollar, Alison Collings, Roger Powell, Rob D Foale, Nicola Thurley, Jeffrey A Brockman, Richard J Mellanby, Danièlle A Gunn-Moore and 1 more

Abstract read
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jennifer Irving McGrathRoyal (Dick) School of Veterinary Studies & Roslin Institute, University of Edinburgh, Easter Bush Veterinary Campus, Midlothian, Edinburgh EH25 9RG, UK.
Wengang ZhangRoyal (Dick) School of Veterinary Studies & Roslin Institute, University of Edinburgh, Easter Bush Veterinary Campus, Midlothian, Edinburgh EH25 9RG, UK.
Regina HollarHill's Pet Nutrition Centre, Topeka, KS 66603, USA.
Alison CollingsIdexx Laboratories, Wetherby LS22 7DN, UK.
Roger PowellDragonVet Consulting Ltd., Hertfordshire G5 1EH, UK.
Rob D FoaleDick White Referrals, Station Farm, London Road, Six Mile Bottom, Cambridgeshire, Cambridge CB8 0UH, UK.ORCID 0000-0001-9762-0051
Nicola ThurleyDick White Referrals, Station Farm, London Road, Six Mile Bottom, Cambridgeshire, Cambridge CB8 0UH, UK.
Jeffrey A BrockmanHill's Pet Nutrition Centre, Topeka, KS 66603, USA.ORCID 0000-0002-0981-8453
Richard J MellanbyRoyal (Dick) School of Veterinary Studies & Roslin Institute, University of Edinburgh, Easter Bush Veterinary Campus, Midlothian, Edinburgh EH25 9RG, UK.ORCID 0000-0002-3467-7007
Danièlle A Gunn-MooreRoyal (Dick) School of Veterinary Studies & Roslin Institute, University of Edinburgh, Easter Bush Veterinary Campus, Midlothian, Edinburgh EH25 9RG, UK.ORCID 0000-0003-2088-503X
Jeffrey J SchoenebeckRoyal (Dick) School of Veterinary Studies & Roslin Institute, University of Edinburgh, Easter Bush Veterinary Campus, Midlothian, Edinburgh EH25 9RG, UK.ORCID 0000-0003-4964-2138

Funding

Biotechnology and Biological Sciences Research Council BBS/E/D/10002070Biotechnology and Biological Sciences Research Council BBS/E/D/10002071Biotechnology and Biological Sciences Research Council BBS/E/D/30002275Biotechnology and Biological Sciences Research Council BBS/E/D/30002276
6 · The paper itself

Abstract

The domestic cat is one of the most popular pets in the world. It is estimated that 89-92% of domestic cats in the UK are non-pedigree Domestic shorthair (DSH), Domestic longhair (DLH), or Domestic semi-longhair cats (DSLH). Despite their popularity, little is known of the UK non-pedigree cats' population structure and breeding dynamics. Using a custom designed single nucleotide variant (SNV) array, this study investigated the population genetics of 1344 UK cats. Principal components analysis (PCA) and fastSTRUCTURE analysis verified that the UK's DSH, DLH, and DSLH cats are random-bred, rather than admixed, mix breed, or crossbred. In contrast to pedigree cats, the linkage disequilibrium of these random-bred cats was least extensive and decayed rapidly. Homozygosity by descent (HBD) analysis showed the majority of non-pedigree cats had proportionally less of their genome in HBD segments compared to pedigree cats, and that these segments were older. Together, these findings suggest that the DSH, DLH, and DSLH cats should be considered as a population of random-bred cats rather than a crossbred or pedigree-admixed cat. Unexpectedly, 19% of random-bred cat genomes displayed a higher proportion of HBD segments associated with more recent inbreeding events. Therefore, while non-pedigree cats as a whole are genetically diverse, they are not impervious to inbreeding and its health risks.

Indexed as

Genetics, PopulationAnimalsCatsGenome-Wide Association StudyLinkage DisequilibriumPolymorphism, Single NucleotideUnited Kingdomautozygositycatgenotypeinbreedingpopulation geneticsrandom-bredSNVstructure

Identifiers

PMID34681013
PMCPMC8535647

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.