Evidence map›Paper›PMID 34680859›Full record

ArticleGenes2021

Genetic and Transcription Profile Analysis of Tissue-Specific Anthocyanin Pigmentation in Carrot Root Phloem.

Florencia Bannoud, Sofia Carvajal, Shelby Ellison, Douglas Senalik, Sebastian Gomez Talquenca, Massimo Iorizzo, Philipp W Simon, Pablo F Cavagnaro

Open access · goldAbstract read
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  4. Morphological characterizations of parsnip (Food science & nutrition · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Florencia BannoudConsejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917, Buenos Aires C1033, Argentina.
Sofia CarvajalConsejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917, Buenos Aires C1033, Argentina.
Shelby EllisonDepartment of Horticulture, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI 53706, USA.
Douglas SenalikUSDA-Agricultural Research Service, Vegetable Crops Research Unit, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI 53706, USA.
Sebastian Gomez TalquencaInstituto Nacional de Tecnología Agropecuaria (INTA) EEA Mendoza, San Martin 3853, Luján de Cuyo, Mendoza M5507, Argentina.
Massimo IorizzoPlants for Human Health Institute, North Carolina State University, Kannapolis, NC 28081, USA.
Philipp W SimonDepartment of Horticulture, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI 53706, USA.
Pablo F CavagnaroConsejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917, Buenos Aires C1033, Argentina.
Consejo Nacional de Investigaciones Científicas y Técnicas · ARNational Agricultural Technology Institute · ARUnited States Department of Agriculture · USNorth Carolina State University · USUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In purple carrots, anthocyanin pigmentation can be expressed in the entire root, or it can display tissue specific-patterns. Within the phloem, purple pigmentation can be found in the outer phloem (OP) (also called the cortex) and inner phloem (IP), or it can be confined exclusively to the OP. In this work, the genetic control underlying tissue-specific anthocyanin pigmentation in the carrot root OP and IP tissues was investigated by means of linkage mapping and transcriptome (RNA-seq) and phylogenetic analyses; followed by gene expression (RT-qPCR) evaluations in two genetic backgrounds, an F

Indexed as

Gene Expression ProfilingAnthocyaninsDaucus carotaGene Expression Regulation, PlantGenes, PlantPhloemPigments, BiologicalPlant RootsReal-Time Polymerase Chain ReactionAnthocyaninsPigments, Biologicalanthocyanincandidate genesDaucus carotagenetic mappingphloem pigmentationRNA-SeqRT-qPCR

Identifiers

PMID34680859
PMCPMC8535259
OpenAlexW3198976904

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.