Evidence map›Paper›PMID 34679927›Full record

ArticleAnimals : an open access journal from MDPI2021

Hybrid Sequencing in Different Types of Goat Skeletal Muscles Reveals Genes Regulating Muscle Development and Meat Quality.

Yangyang Pan, Sijia Chen, Shu Niu, Xilin Bi, Liying Qiao, Kaijie Yang, Jianhua Liu, Wenzhong Liu

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Temporal Transcriptome Dynamics ofAnimals : an open access journal from MDPI · 2024
    Article
  4. Article
  5. Article
  6. Full-Length Transcriptome and Gene Expression Analysis of DifferentAnimals : an open access journal from MDPI · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yangyang PanDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, Shanxi Agricultural University, Taigu 030801, China.ORCID 0000-0002-3920-1374
Sijia ChenDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, Shanxi Agricultural University, Taigu 030801, China.
Shu NiuDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, Shanxi Agricultural University, Taigu 030801, China.
Xilin BiDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, Shanxi Agricultural University, Taigu 030801, China.
Liying QiaoDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, Shanxi Agricultural University, Taigu 030801, China.
Kaijie YangDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, Shanxi Agricultural University, Taigu 030801, China.
Jianhua LiuDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, Shanxi Agricultural University, Taigu 030801, China.
Wenzhong LiuDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, Shanxi Agricultural University, Taigu 030801, China.
Shanxi Agricultural University · CN

Funding

Graduate Innovation Project of Shanxi Province 2019BY066International Postdoctoral Exchange Fellowship Program PC2018051Shanxi "1331 Project" Key Disciplines of Animal Sciences J201811301
6 · The paper itself

Abstract

Domestic goats are commonly reared for meat and milk production in several regions of the world. However, the genetic mechanism underlying muscle development and meat quality of goats is limited. Therefore, the aim of this study was to identify known and novel genes regulating muscle development and meat quality of goats using second- and third-generation sequencing technologies. To achieve this, the meat quality and transcriptomes of longissimus dorsi (LD) and biceps femoris (BF) muscle tissues of Lingqiu Greyback goats were examined and compared. Differentially expressed genes (DEGs) and isoforms (DEIs) were functionally annotated. Results showed that 45,574 full-length transcripts covering 18,491 loci were characterized, and 12,566 genes were co-expressed in all samples. Differential expression analysis identified 231 DEGs, including 45 novel genes in the LD and BF muscles of the goats. Additionally, 1173 DEIs were found, in which 642 novel isoforms were identified in this study. Functional annotation and pathway analysis of the DEGs and DEIs revealed that some of them were associated with muscle growth and lipid metabolism. Overall, the findings of this study contribute to the understanding of the transcriptomic diversity underlying meat quality and muscle development of goat.

Indexed as

full-length transcriptomegoatgrowthhybrid sequencingmeat qualityskeletal muscle

Identifiers

PMID34679927
PMCPMC8532877
OpenAlexW3204822434

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.