Evidence map›Paper›PMID 34679510›Full record

ArticleDiagnostics (Basel, Switzerland)2021

Predicting Mechanical Ventilation and Mortality in COVID-19 Using Radiomics and Deep Learning on Chest Radiographs: A Multi-Institutional Study.

Joseph Bae, Saarthak Kapse, Gagandeep Singh, Rishabh Gattu, Syed Ali, Neal Shah, Colin Marshall, Jonathan Pierce, Tej Phatak, Amit Gupta and 3 more

Abstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 3 syntheses or guidelines pooled it.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Joseph BaeDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11794, USA.ORCID 0000-0002-9440-6655
Saarthak KapseDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11794, USA.ORCID 0000-0002-5426-4111
Gagandeep SinghDepartment of Radiology, Newark Beth Israel Medical Center, Newark, NJ 07112, USA.
Rishabh GattuDepartment of Radiology, Newark Beth Israel Medical Center, Newark, NJ 07112, USA.
Syed AliDepartment of Radiology, Newark Beth Israel Medical Center, Newark, NJ 07112, USA.
Neal ShahDepartment of Radiology, University Hospitals Cleveland Medical Center, Cleveland, OH 44106, USA.ORCID 0000-0003-4344-8246
Colin MarshallDepartment of Radiology, University Hospitals Cleveland Medical Center, Cleveland, OH 44106, USA.
Jonathan PierceDepartment of Radiology, University Hospitals Cleveland Medical Center, Cleveland, OH 44106, USA.
Tej PhatakDepartment of Radiology, Newark Beth Israel Medical Center, Newark, NJ 07112, USA.
Amit GuptaDepartment of Radiology, University Hospitals Cleveland Medical Center, Cleveland, OH 44106, USA.
Jeremy GreenDepartment of Radiology, Newark Beth Israel Medical Center, Newark, NJ 07112, USA.
Nikhil MadanDivision of Pulmonary Critical Care, Department of Internal Medicine, Newark Beth Israel Medical Center, Newark, NJ 07112, USA.
Prateek PrasannaDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11794, USA.ORCID 0000-0002-3068-3573

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008444 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FROHMAN, MICHAEL A. · 1992 to 2024
$12.6M
NIGMS NIH HHS T32 GM007367NIGMS NIH HHS T32GM008444
6 · The paper itself

Abstract

In this study, we aimed to predict mechanical ventilation requirement and mortality using computational modeling of chest radiographs (CXRs) for coronavirus disease 2019 (COVID-19) patients. This two-center, retrospective study analyzed 530 deidentified CXRs from 515 COVID-19 patients treated at Stony Brook University Hospital and Newark Beth Israel Medical Center between March and August 2020. Linear discriminant analysis (LDA), quadratic discriminant analysis (QDA), and random forest (RF) machine learning classifiers to predict mechanical ventilation requirement and mortality were trained and evaluated using radiomic features extracted from patients' CXRs. Deep learning (DL) approaches were also explored for the clinical outcome prediction task and a novel radiomic embedding framework was introduced. All results are compared against radiologist grading of CXRs (zone-wise expert severity scores). Radiomic classification models had mean area under the receiver operating characteristic curve (mAUCs) of 0.78 ± 0.05 (sensitivity = 0.72 ± 0.07, specificity = 0.72 ± 0.06) and 0.78 ± 0.06 (sensitivity = 0.70 ± 0.09, specificity = 0.73 ± 0.09), compared with expert scores mAUCs of 0.75 ± 0.02 (sensitivity = 0.67 ± 0.08, specificity = 0.69 ± 0.07) and 0.79 ± 0.05 (sensitivity = 0.69 ± 0.08, specificity = 0.76 ± 0.08) for mechanical ventilation requirement and mortality prediction, respectively. Classifiers using both expert severity scores and radiomic features for mechanical ventilation (mAUC = 0.79 ± 0.04, sensitivity = 0.71 ± 0.06, specificity = 0.71 ± 0.08) and mortality (mAUC = 0.83 ± 0.04, sensitivity = 0.79 ± 0.07, specificity = 0.74 ± 0.09) demonstrated improvement over either artificial intelligence or radiologist interpretation alone. Our results also suggest instances in which the inclusion of radiomic features in DL improves model predictions over DL alone. The models proposed in this study and the prognostic information they provide might aid physician decision making and efficient resource allocation during the COVID-19 pandemic.

Indexed as

artificial intelligenceCOVID-19deep learningmachine learningradiographyradiomics

Identifiers

PMID34679510
PMCPMC8535062

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.