Evidence map›Paper›PMID 34675821›Full record

ArticleFrontiers in physiology2021

Cross-Talk Between Intestinal Microbiota and Host Gene Expression in Gilthead Sea Bream (

Fernando Naya-Català, Gabriella do Vale Pereira, M Carla Piazzon, Ana Margarida Fernandes, Josep Alvar Calduch-Giner, Ariadna Sitjà-Bobadilla, Luis E C Conceição, Jaume Pérez-Sánchez

Open access · goldAbstract read
In one paragraph

Article in Frontiers in physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 56 citations in OpenAlex.

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  12. Gene Expression Study in Gilthead Seabream (International journal of molecular sciences · 2024
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  13. Sustainable Fish Meal-Free Diets for Gilthead Sea Bream (Animals : an open access journal from MDPI · 2024
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  14. Article
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  18. Live Yeast (Animals : an open access journal from MDPI · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Fernando Naya-CatalàNutrigenomics and Fish Growth Endocrinology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Castellón, Spain.
Gabriella do Vale PereiraSPAROS Lda, Area Empresarial de Marim, Olhăo, Portugal.
M Carla PiazzonFish Pathology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Castellón, Spain.
Ana Margarida FernandesSPAROS Lda, Area Empresarial de Marim, Olhăo, Portugal.
Josep Alvar Calduch-GinerNutrigenomics and Fish Growth Endocrinology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Castellón, Spain.
Ariadna Sitjà-BobadillaFish Pathology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Castellón, Spain.
Luis E C ConceiçãoSPAROS Lda, Area Empresarial de Marim, Olhăo, Portugal.
Jaume Pérez-SánchezNutrigenomics and Fish Growth Endocrinology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Castellón, Spain.
Instituto de Acuicultura Torre de la Sal · ESSparos (Portugal) · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

New types of fish feed based on processed animal proteins (PAPs), insect meal, yeast, and microbial biomasses have been used with success in gilthead sea bream. However, some drawback effects on feed conversion and inflammatory systemic markers were reported in different degrees with PAP- and non-PAP-based feed formulations. Here, we focused on the effects of control and two experimental diets on gut mucosal-adherent microbiota, and how it correlated with host transcriptomics at the local (intestine) and systemic (liver and head kidney) levels. The use of tissue-specific PCR-arrays of 93 genes in total rendered 13, 12, and 9 differentially expressed (DE) genes in the intestine, liver, and head kidney, respectively. Illumina sequencing of gut microbiota yielded a mean of 125,350 reads per sample, assigned to 1,281 operational taxonomic unit (OTUs). Bacterial richness and alpha diversity were lower in fish fed with the PAP diet, and discriminant analysis displayed 135 OTUs driving the separation between groups with 43 taxa correlating with 27 DE genes. The highest expression of intestinal

Indexed as

algae mealfish mealgut microbiotahost transcriptomicsinflammatory markersinsect proteinslipid metabolismprocessed animal proteins

Identifiers

PMID34675821
PMCPMC8523787
OpenAlexW3202193102

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.