Evidence map›Paper›PMID 34673924›Full record

ArticleThe Journal of antimicrobial chemotherapy2021

Large diversity of linezolid-resistant isolates discovered in food-producing animals through linezolid selective monitoring in Belgium in 2019.

Michaël Timmermans, Bert Bogaerts, Kevin Vanneste, Sigrid C J De Keersmaecker, Nancy H C Roosens, Carole Kowalewicz, Guillaume Simon, Maria A Argudín, Ariane Deplano, Marie Hallin and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Prevalence ofPathogens (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Nasotracheal enterococcal carriage and resistomes: detection of optrA-, poxtA- and cfrD-carrying strains in migratory birds, livestock, pets, and in-contact humans in Spain.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2023
    Article
  14. Article
  15. Article
  16. Occurrence ofAntibiotics (Basel, Switzerland) · 2023
    Article
  17. High occurrence ofEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Michaël TimmermansVeterinary Bacteriology, Sciensano, Ixelles, Belgium.
Bert BogaertsTransversal Activities in Applied Genomics, Sciensano, Ixelles, Belgium.
Kevin VannesteTransversal Activities in Applied Genomics, Sciensano, Ixelles, Belgium.
Sigrid C J De KeersmaeckerTransversal Activities in Applied Genomics, Sciensano, Ixelles, Belgium.
Nancy H C RoosensTransversal Activities in Applied Genomics, Sciensano, Ixelles, Belgium.
Carole KowalewiczVeterinary Bacteriology, Sciensano, Ixelles, Belgium.
Guillaume SimonVeterinary Bacteriology, Sciensano, Ixelles, Belgium.
Maria A ArgudínNational Reference Centre-Staphylococcus aureus, Department of Microbiology, Hôpital Erasme, Université Libre de Bruxelles, Brussels, Belgium.
Ariane DeplanoNational Reference Centre-Staphylococcus aureus, Department of Microbiology, Hôpital Erasme, Université Libre de Bruxelles, Brussels, Belgium.
Marie HallinNational Reference Centre-Staphylococcus aureus, Department of Microbiology, Hôpital Erasme, Université Libre de Bruxelles, Brussels, Belgium.
Pierre WattiauVeterinary Bacteriology, Sciensano, Ixelles, Belgium.
David FretinVeterinary Bacteriology, Sciensano, Ixelles, Belgium.
Olivier DenisEcole de Santé Publique, Université Libre de Bruxelles, Brussels, Belgium.
Cécile BolandVeterinary Bacteriology, Sciensano, Ixelles, Belgium.
Sciensano (Belgium) · BEUniversité Libre de Bruxelles · BEErasmus Hospital · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLinezolid is a critically important antibiotic used to treat human infections caused by MRSA and VRE. While linezolid is not licensed for food-producing animals, linezolid-resistant (LR) isolates have been reported in European countries, including Belgium.

objectivesTo: (i) assess LR occurrence in staphylococci and enterococci isolated from different Belgian food-producing animals in 2019 through selective monitoring; and (ii) investigate the genomes and relatedness of these isolates.

methodsFaecal samples (n = 1325) and nasal swab samples (n = 148) were analysed with a protocol designed to select LR bacteria, including a 44-48 h incubation period. The presence of LR chromosomal mutations, transferable LR genes and their genetic organizations and other resistance genes, as well as LR isolate relatedness (from this study and the NCBI database) were assessed through WGS.

resultsThe LR rate differed widely between animal host species, with the highest rates occurring in nasal samples from pigs and sows (25.7% and 20.5%, respectively) and faecal samples from veal calves (16.4%). WGS results showed that LR determinants are present in a large diversity of isolates circulating in the agricultural sector, with some isolates closely related to human isolates, posing a human health risk.

conclusionsLR dedicated monitoring with WGS analysis could help to better understand the spread of LR. Cross-selection of LR transferable genes through other antibiotic use should be considered in future action plans aimed at combatting antimicrobial resistance and in future objectives for the rational use of antibiotics in a One Health perspective.

Indexed as

Enterococcus faeciumGram-Positive Bacterial InfectionsAnimalsAnti-Bacterial AgentsBelgiumCattleDrug Resistance, BacterialFemaleLinezolidMicrobial Sensitivity TestsSwineAnti-Bacterial AgentsLinezolid

Identifiers

PMID34673924
PMCPMC8730767
OpenAlexW3205586765

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.