Evidence map›Paper›PMID 34673820›Full record

ArticlePloS one2021

Genome-wide identification, structural and gene expression analysis of the nitrate transporters (NRTs) family in potato (Solanum tuberosum L.).

Jingying Zhang, Zhijun Han, Yue Lu, Yanfei Zhao, Yaping Wang, Jiayue Zhang, Haoran Ma, Yu Zhu Han

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jingying ZhangCollege of horticulture, Jilin Agricultural University, Changchun City, P.R. China.
Zhijun HanCollege of horticulture, Jilin Agricultural University, Changchun City, P.R. China.
Yue LuCollege of horticulture, Jilin Agricultural University, Changchun City, P.R. China.
Yanfei ZhaoCollege of horticulture, Jilin Agricultural University, Changchun City, P.R. China.
Yaping WangCollege of horticulture, Jilin Agricultural University, Changchun City, P.R. China.
Jiayue ZhangCollege of horticulture, Jilin Agricultural University, Changchun City, P.R. China.
Haoran MaCollege of horticulture, Jilin Agricultural University, Changchun City, P.R. China.
Yu Zhu HanCollege of horticulture, Jilin Agricultural University, Changchun City, P.R. China.ORCID 0000-0002-2029-6799
Jilin Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrogen (N2) is the most important source of mineral N for plant growth, which was mainly transported by nitrate transporters (NRTs). However, little is known about the NRT gene family in potato. In this study, StNRT gene family members were identified in potato. In addition, we performed StNRT subfamily classification, gene structure and distribution analysis, and conserved domain prediction using various bioinformatics tools. Totally, 39 StNRT gene members were identified in potato genome, including 33, 4 and 2 member belong to NRT1, NRT2, and NRT3, respectively. These 39 StNRT genes were randomly distributed on all chromosomes. The collinearity results show that StNRT members in potato are closely related to Solanum lycopersicum and Solanum melongena. For the expression, different members of StNRT play different roles in leaves and roots. Especially under sufficient nitrogen conditions, different members have a clear distribution in different tissues. These results provide valuable information for identifying the members of the StNRT family in potato and could provide functional characterization of StNRT genes in further research.

Indexed as

Anion Transport ProteinsGene Expression Regulation, PlantGenes, PlantGenome, PlantMultigene FamilyNitrate TransportersPlant ProteinsSolanum tuberosumTranscriptomeAnion Transport ProteinsNitrate TransportersPlant Proteins

Identifiers

PMID34673820
PMCPMC8530285
OpenAlexW3205501362

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.