Evidence map›Paper›PMID 34673309›Full record

ArticleInternational journal of medical informatics2021

Two data-driven approaches to identifying the spectrum of problematic opioid use: A pilot study within a chronic pain cohort.

Lori Schirle, Alvin Jeffery, Ali Yaqoob, Sandra Sanchez-Roige, David C Samuels

Abstract read
In one paragraph

Article in International journal of medical informatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Review
  6. Evaluation of an emergency department-based approach to reduce subsequent opioid overdoses.Journal of the American College of Emergency Physicians open · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lori SchirleVanderbilt University School of Nursing, 461 21st Avenue South, Nashville, TN 37240, USA. Electronic address: lori.schirle@vanderbilt.edu.
Alvin JefferyVanderbilt University School of Nursing, 461 21st Avenue South, Nashville, TN 37240, USA; Vanderbilt University, Department of Biomedical Informatics, 2525 West End Ave #1475, Nashville, TN 37203, USA. Electronic address: alvin.d.jeffery@vanderbilt.edu.
Ali YaqoobVanderbilt University, Department of Biomedical Informatics, 2525 West End Ave #1475, Nashville, TN 37203, USA; Vanderbilt University, Data Science Institute, Sony Building, # 2000, 1400 18th Avenue South, Nashville, TN 37212, USA. Electronic address: Ali.yaqoob@vumc.org.
Sandra Sanchez-RoigeVanderbilt University Medical Center, Division of Genetic Medicine, Robinson Research Building #536, 220 Pierce Avenue, Nashville, TN 37232, USA; University of California, Department of Psychiatry, 9500 Gilman Dr., LaJolla, CA 92093, USA. Electronic address: sanchezroige@health.ucsd.edu.
David C SamuelsVanderbilt University School of Medicine, Light Hall #507B, Department of Molecular Physiology and Biophysics, Vanderbilt Genetics Institute, 2215 Garland Avenue, Nashville, TN 37232, USA. Electronic address: david.c.samuels@vanderbilt.Edu.

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
Learning Health System Scholar Program at VanderbiltK12HS026395 · AHRQ · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ROTHMAN, RUSSELL L., ROUMIE, CHRISTIANNE L. · 2018 to 2022
$2.7M
High-Performance Computer Cluster for Biomedical ResearchS10OD023680 · OD · VANDERBILT UNIVERSITY · PI MEILER, JENS · 2017 to 2017
$587k
Hybrid Methods for Prediction and Design of Novel Human Influenza AntibodiesR56AI110750 · NIAID · VANDERBILT UNIVERSITY · PI CROWE, JAMES E, MEILER, JENS · 2014 to 2014
$433k
AHRQ HHS K12 HS026395NCATS NIH HHS UL1 TR002243NIAID NIH HHS R56 AI110750NIH HHS S10 OD023680
6 · The paper itself

Abstract

backgroundAlthough electronic health records (EHR) have significant potential for the study of opioid use disorders (OUD), detecting OUD in clinical data is challenging. Models using EHR data to predict OUD often rely on case/control classifications focused on extreme opioid use. There is a need to expand this work to characterize the spectrum of problematic opioid use.

methodsUsing a large academic medical center database, we developed 2 data-driven methods of OUD detection: (1) a Comorbidity Score developed from a Phenome-Wide Association Study of phenotypes associated with OUD and (2) a Text-based Score using natural language processing to identify OUD-related concepts in clinical notes. We evaluated the performance of both scores against a manual review with correlation coefficients, Wilcoxon rank sum tests, and area-under the receiver operating characteristic curves. Records with the highest Comorbidity and Text-based scores were re-evaluated by manual review to explore discrepancies.

resultsBoth the Comorbidity and Text-based OUD risk scores were significantly elevated in the patients judged as High Evidence for OUD in the manual review compared to those with No Evidence (p = 1.3E-5 and 1.3E-6, respectively). The risk scores were positively correlated with each other (rho = 0.52, p < 0.001). AUCs for the Comorbidity and Text-based scores were high (0.79 and 0.76, respectively). Follow-up manual review of discrepant findings revealed strengths of data-driven methods over manual review, and opportunities for improvement in risk assessment.

conclusionRisk scores comprising comorbidities and text offer differing but synergistic insights into characterizing problematic opioid use. This pilot project establishes a foundation for more robust work in the future.

Indexed as

Chronic PainOpioid-Related DisordersAnalgesics, OpioidHumansNatural Language ProcessingPilot ProjectsAnalgesics, OpioidChronic painElectronic health recordsNatural language processingOpioid use disorderPhenome-wide association study

Identifiers

PMID34673309
PMCPMC8609775

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.